Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 AC079416.2-201ENST00000625035 1193 ntBASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 AL358472.4-201ENST00000633140 710 ntBASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNFT1Q5M7Z0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 TSPY23P-201ENST00000440136 739 ntBASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 AL512604.3-201ENST00000569583 964 ntBASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNFT1Q5M7Z0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 AC092647.4-201ENST00000457211 535 ntBASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 MIR4674-201ENST00000582457 87 ntBASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNFT1Q5M7Z0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.27■□□□□ 0.35
RNFT1Q5M7Z0 PCDHAC2-203ENST00000615316 3011 ntBASIC17.27■□□□□ 0.35
RNFT1Q5M7Z0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNFT1Q5M7Z0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
RNFT1Q5M7Z0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNFT1Q5M7Z0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.27■□□□□ 0.35
RNFT1Q5M7Z0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNFT1Q5M7Z0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.27■□□□□ 0.35
RNFT1Q5M7Z0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.27■□□□□ 0.35
RNFT1Q5M7Z0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 AC140113.3-201ENST00000605663 199 ntBASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.26■□□□□ 0.35
RNFT1Q5M7Z0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms