Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 AL512353.2-201ENST00000448759 1962 ntBASIC18.42■□□□□ 0.54
PDCD4Q53EL6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 AL121906.2-201ENST00000621597 723 ntBASIC18.42■□□□□ 0.54
PDCD4Q53EL6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 AC104581.1-202ENST00000635932 2618 ntBASIC18.42■□□□□ 0.54
PDCD4Q53EL6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD4Q53EL6 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.42■□□□□ 0.54
PDCD4Q53EL6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.41■□□□□ 0.54
PDCD4Q53EL6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 DUSP5P2-201ENST00000426873 1033 ntBASIC18.4■□□□□ 0.54
PDCD4Q53EL6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 FEM1AP3-201ENST00000403722 1741 ntBASIC18.4■□□□□ 0.54
PDCD4Q53EL6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD4Q53EL6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PDCD4Q53EL6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.39■□□□□ 0.54
PDCD4Q53EL6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PDCD4Q53EL6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDCD4Q53EL6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms