Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.95■□□□□ 0.94
TRIM71Q2Q1W2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TRIM71Q2Q1W2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM71Q2Q1W2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM71Q2Q1W2 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.95■□□□□ 0.94
TRIM71Q2Q1W2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM71Q2Q1W2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM71Q2Q1W2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM71Q2Q1W2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM71Q2Q1W2 ZNF815P-204ENST00000434898 1737 ntBASIC20.95■□□□□ 0.94
TRIM71Q2Q1W2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM71Q2Q1W2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 AC099778.1-201ENST00000568593 1911 ntBASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 HBZP1-201ENST00000354915 429 ntBASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 ATP5G2P1-201ENST00000433580 426 ntBASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM71Q2Q1W2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM71Q2Q1W2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM71Q2Q1W2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM71Q2Q1W2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM71Q2Q1W2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM71Q2Q1W2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.93■□□□□ 0.94
TRIM71Q2Q1W2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.93■□□□□ 0.94
TRIM71Q2Q1W2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM71Q2Q1W2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.93■□□□□ 0.94
TRIM71Q2Q1W2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM71Q2Q1W2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM71Q2Q1W2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM71Q2Q1W2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM71Q2Q1W2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.93■□□□□ 0.94
TRIM71Q2Q1W2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 NPAP1P7-201ENST00000613027 823 ntBASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM71Q2Q1W2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 TPM4P1-201ENST00000436100 807 ntBASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 AC092597.1-201ENST00000487352 616 ntBASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 AC012313.10-201ENST00000623509 926 ntBASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM71Q2Q1W2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 GPAT2P1-201ENST00000444924 1672 ntBASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms