Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 VENTXP5-201ENST00000523979 775 ntBASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTC1Q2NKJ3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 AC087289.5-201ENST00000586076 3175 ntBASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTC1Q2NKJ3 KRT16P6-202ENST00000425692 1426 ntBASIC20.52■□□□□ 0.87
CTC1Q2NKJ3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.52■□□□□ 0.87
CTC1Q2NKJ3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 ATP5G2P1-201ENST00000433580 426 ntBASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 AC012313.10-201ENST00000623509 926 ntBASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.51■□□□□ 0.87
CTC1Q2NKJ3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
CTC1Q2NKJ3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms