Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 AC073648.6-201ENST00000641589 218 ntBASIC19.4■□□□□ 0.7
CDH17Q12864 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CDH17Q12864 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDH17Q12864 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CDH17Q12864 AL020996.1-203ENST00000536896 2307 ntBASIC19.4■□□□□ 0.7
CDH17Q12864 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH17Q12864 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH17Q12864 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH17Q12864 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CDH17Q12864 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH17Q12864 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH17Q12864 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH17Q12864 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH17Q12864 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
CDH17Q12864 AC124016.1-201ENST00000609552 612 ntBASIC19.39■□□□□ 0.69
CDH17Q12864 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.39■□□□□ 0.69
CDH17Q12864 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.39■□□□□ 0.69
CDH17Q12864 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH17Q12864 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
CDH17Q12864 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH17Q12864 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH17Q12864 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH17Q12864 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CDH17Q12864 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH17Q12864 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH17Q12864 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH17Q12864 AC093503.3-201ENST00000624917 2352 ntBASIC19.39■□□□□ 0.69
CDH17Q12864 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH17Q12864 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH17Q12864 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH17Q12864 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH17Q12864 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
CDH17Q12864 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH17Q12864 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH17Q12864 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CDH17Q12864 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH17Q12864 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CDH17Q12864 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDH17Q12864 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH17Q12864 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.38■□□□□ 0.69
CDH17Q12864 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CDH17Q12864 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CDH17Q12864 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CDH17Q12864 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH17Q12864 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CDH17Q12864 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH17Q12864 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH17Q12864 AC110285.5-201ENST00000611501 352 ntBASIC19.38■□□□□ 0.69
CDH17Q12864 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDH17Q12864 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.38■□□□□ 0.69
CDH17Q12864 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDH17Q12864 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH17Q12864 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH17Q12864 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CDH17Q12864 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH17Q12864 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.37■□□□□ 0.69
CDH17Q12864 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH17Q12864 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH17Q12864 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH17Q12864 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CDH17Q12864 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH17Q12864 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.37■□□□□ 0.69
CDH17Q12864 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CDH17Q12864 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH17Q12864 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH17Q12864 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.37■□□□□ 0.69
CDH17Q12864 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH17Q12864 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CDH17Q12864 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH17Q12864 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH17Q12864 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.37■□□□□ 0.69
CDH17Q12864 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CDH17Q12864 FEM1AP3-201ENST00000403722 1741 ntBASIC19.37■□□□□ 0.69
CDH17Q12864 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH17Q12864 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH17Q12864 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH17Q12864 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH17Q12864 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH17Q12864 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH17Q12864 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CDH17Q12864 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH17Q12864 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH17Q12864 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH17Q12864 AC006333.2-201ENST00000607957 2099 ntBASIC19.36■□□□□ 0.69
CDH17Q12864 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH17Q12864 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH17Q12864 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH17Q12864 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH17Q12864 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH17Q12864 TSPY21P-201ENST00000433481 731 ntBASIC19.36■□□□□ 0.69
CDH17Q12864 AC128676.1-201ENST00000454392 318 ntBASIC19.36■□□□□ 0.69
CDH17Q12864 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH17Q12864 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH17Q12864 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.36■□□□□ 0.69
CDH17Q12864 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH17Q12864 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.36■□□□□ 0.69
CDH17Q12864 MIR4651-201ENST00000582622 73 ntBASIC19.36■□□□□ 0.69
CDH17Q12864 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CDH17Q12864 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH17Q12864 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms