Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-1P78426 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-1P78426 LIN28AP1-201ENST00000429574 405 ntBASIC16.88■□□□□ 0.29
NKX6-1P78426 KSR1P1-201ENST00000446298 240 ntBASIC16.88■□□□□ 0.29
NKX6-1P78426 AC104076.2-201ENST00000448912 469 ntBASIC16.88■□□□□ 0.29
NKX6-1P78426 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-1P78426 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.88■□□□□ 0.29
NKX6-1P78426 C1QL1P1-201ENST00000568105 661 ntBASIC16.88■□□□□ 0.29
NKX6-1P78426 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-1P78426 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-1P78426 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.88■□□□□ 0.29
NKX6-1P78426 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.88■□□□□ 0.29
NKX6-1P78426 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NKX6-1P78426 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-1P78426 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-1P78426 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NKX6-1P78426 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NKX6-1P78426 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-1P78426 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
NKX6-1P78426 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-1P78426 TMEM179-206ENST00000616017 1645 ntBASIC16.88■□□□□ 0.29
NKX6-1P78426 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.88■□□□□ 0.29
NKX6-1P78426 TCF3P1-201ENST00000423021 1937 ntBASIC16.88■□□□□ 0.29
NKX6-1P78426 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-1P78426 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX6-1P78426 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-1P78426 AC073508.3-201ENST00000619697 1419 ntBASIC16.87■□□□□ 0.29
NKX6-1P78426 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.87■□□□□ 0.29
NKX6-1P78426 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.87■□□□□ 0.29
NKX6-1P78426 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-1P78426 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-1P78426 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.87■□□□□ 0.29
NKX6-1P78426 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-1P78426 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.87■□□□□ 0.29
NKX6-1P78426 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-1P78426 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-1P78426 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-1P78426 AC087289.5-201ENST00000586076 3175 ntBASIC16.87■□□□□ 0.29
NKX6-1P78426 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-1P78426 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-1P78426 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-1P78426 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.87■□□□□ 0.29
NKX6-1P78426 TUBB8P6-201ENST00000436895 1288 ntBASIC16.87■□□□□ 0.29
NKX6-1P78426 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.87■□□□□ 0.29
NKX6-1P78426 AC116562.2-201ENST00000507042 360 ntBASIC16.87■□□□□ 0.29
NKX6-1P78426 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.87■□□□□ 0.29
NKX6-1P78426 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
NKX6-1P78426 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.87■□□□□ 0.29
NKX6-1P78426 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.87■□□□□ 0.29
NKX6-1P78426 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.87■□□□□ 0.29
NKX6-1P78426 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.87■□□□□ 0.29
NKX6-1P78426 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-1P78426 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-1P78426 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NKX6-1P78426 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-1P78426 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX6-1P78426 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.87■□□□□ 0.29
NKX6-1P78426 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.86■□□□□ 0.29
NKX6-1P78426 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NKX6-1P78426 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX6-1P78426 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NKX6-1P78426 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NKX6-1P78426 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX6-1P78426 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NKX6-1P78426 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX6-1P78426 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.86■□□□□ 0.29
NKX6-1P78426 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX6-1P78426 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX6-1P78426 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX6-1P78426 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX6-1P78426 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
NKX6-1P78426 ATP5G1P1-201ENST00000448724 379 ntBASIC16.86■□□□□ 0.29
NKX6-1P78426 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NKX6-1P78426 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.86■□□□□ 0.29
NKX6-1P78426 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.86■□□□□ 0.29
NKX6-1P78426 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.86■□□□□ 0.29
NKX6-1P78426 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NKX6-1P78426 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.86■□□□□ 0.29
NKX6-1P78426 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX6-1P78426 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NKX6-1P78426 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NKX6-1P78426 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NKX6-1P78426 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-1P78426 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NKX6-1P78426 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-1P78426 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
NKX6-1P78426 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-1P78426 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.85■□□□□ 0.29
NKX6-1P78426 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NKX6-1P78426 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.85■□□□□ 0.29
NKX6-1P78426 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-1P78426 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-1P78426 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-1P78426 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.85■□□□□ 0.29
NKX6-1P78426 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.85■□□□□ 0.29
NKX6-1P78426 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.85■□□□□ 0.29
NKX6-1P78426 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.85■□□□□ 0.29
NKX6-1P78426 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NKX6-1P78426 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX6-1P78426 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms