Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEP78395 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEP78395 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEP78395 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEP78395 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PRAMEP78395 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEP78395 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEP78395 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PRAMEP78395 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRAMEP78395 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRAMEP78395 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRAMEP78395 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
PRAMEP78395 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRAMEP78395 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEP78395 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.33■□□□□ 0.68
PRAMEP78395 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.33■□□□□ 0.68
PRAMEP78395 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.33■□□□□ 0.68
PRAMEP78395 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEP78395 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.33■□□□□ 0.68
PRAMEP78395 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.33■□□□□ 0.68
PRAMEP78395 TEX21P-204ENST00000641479 1693 ntBASIC19.33■□□□□ 0.68
PRAMEP78395 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEP78395 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PRAMEP78395 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEP78395 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEP78395 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.32■□□□□ 0.68
PRAMEP78395 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEP78395 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEP78395 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEP78395 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEP78395 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEP78395 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEP78395 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEP78395 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEP78395 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PRAMEP78395 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEP78395 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEP78395 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PRAMEP78395 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PRAMEP78395 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEP78395 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.32■□□□□ 0.68
PRAMEP78395 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
PRAMEP78395 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEP78395 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PRAMEP78395 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEP78395 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEP78395 AC073648.6-201ENST00000641589 218 ntBASIC19.32■□□□□ 0.68
PRAMEP78395 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEP78395 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEP78395 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEP78395 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PRAMEP78395 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.32■□□□□ 0.68
PRAMEP78395 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.32■□□□□ 0.68
PRAMEP78395 AC141586.3-201ENST00000562166 1838 ntBASIC19.32■□□□□ 0.68
PRAMEP78395 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEP78395 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PRAMEP78395 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEP78395 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PRAMEP78395 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEP78395 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.31■□□□□ 0.68
PRAMEP78395 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEP78395 LINC01465-201ENST00000408887 1940 ntBASIC19.31■□□□□ 0.68
PRAMEP78395 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEP78395 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEP78395 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEP78395 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEP78395 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.31■□□□□ 0.68
PRAMEP78395 POU5F1P3-201ENST00000428824 1078 ntBASIC19.31■□□□□ 0.68
PRAMEP78395 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
PRAMEP78395 C1QL1P1-201ENST00000568105 661 ntBASIC19.31■□□□□ 0.68
PRAMEP78395 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.31■□□□□ 0.68
PRAMEP78395 MIR4651-201ENST00000582622 73 ntBASIC19.31■□□□□ 0.68
PRAMEP78395 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PRAMEP78395 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEP78395 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEP78395 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEP78395 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEP78395 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PRAMEP78395 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEP78395 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.31■□□□□ 0.68
PRAMEP78395 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEP78395 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEP78395 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PRAMEP78395 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.31■□□□□ 0.68
PRAMEP78395 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PRAMEP78395 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEP78395 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEP78395 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.3■□□□□ 0.68
PRAMEP78395 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEP78395 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEP78395 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEP78395 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PRAMEP78395 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PRAMEP78395 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEP78395 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEP78395 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEP78395 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.3■□□□□ 0.68
PRAMEP78395 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEP78395 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEP78395 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms