Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.58□□□□□ -0.24
RPL39P62891 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RPL39P62891 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RPL39P62891 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RPL39P62891 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RPL39P62891 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
RPL39P62891 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RPL39P62891 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.58□□□□□ -0.24
RPL39P62891 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RPL39P62891 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RPL39P62891 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RPL39P62891 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RPL39P62891 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RPL39P62891 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RPL39P62891 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.58□□□□□ -0.24
RPL39P62891 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
RPL39P62891 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
RPL39P62891 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.57□□□□□ -0.24
RPL39P62891 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.57□□□□□ -0.24
RPL39P62891 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 ZNF815P-204ENST00000434898 1737 ntBASIC13.57□□□□□ -0.24
RPL39P62891 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.57□□□□□ -0.24
RPL39P62891 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 AL162412.1-201ENST00000567129 965 ntBASIC13.57□□□□□ -0.24
RPL39P62891 RALB-208ENST00000631312 311 ntTSL 5 BASIC13.57□□□□□ -0.24
RPL39P62891 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.57□□□□□ -0.24
RPL39P62891 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.57□□□□□ -0.24
RPL39P62891 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.57□□□□□ -0.24
RPL39P62891 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
RPL39P62891 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RPL39P62891 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.57□□□□□ -0.24
RPL39P62891 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RPL39P62891 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RPL39P62891 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RPL39P62891 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
RPL39P62891 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
RPL39P62891 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 NOC2LP2-201ENST00000407594 1944 ntBASIC13.56□□□□□ -0.24
RPL39P62891 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RPL39P62891 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.56□□□□□ -0.24
RPL39P62891 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.56□□□□□ -0.24
RPL39P62891 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
RPL39P62891 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
RPL39P62891 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.56□□□□□ -0.24
RPL39P62891 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 KRT18P68-201ENST00000392293 1000 ntBASIC13.56□□□□□ -0.24
RPL39P62891 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RPL39P62891 KRT18P61-201ENST00000585825 1298 ntBASIC13.56□□□□□ -0.24
RPL39P62891 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
RPL39P62891 RAB43-208ENST00000615093 783 ntTSL 5 BASIC13.56□□□□□ -0.24
RPL39P62891 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
RPL39P62891 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
RPL39P62891 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.56□□□□□ -0.24
RPL39P62891 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 AP000997.3-201ENST00000623333 2250 ntBASIC13.56□□□□□ -0.24
RPL39P62891 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
RPL39P62891 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RPL39P62891 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
RPL39P62891 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RPL39P62891 IRX1P1-201ENST00000438849 1838 ntBASIC13.55□□□□□ -0.24
RPL39P62891 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms