Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
WNT3AP56704 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
WNT3AP56704 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
WNT3AP56704 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.4■□□□□ 0.7
WNT3AP56704 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
WNT3AP56704 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
WNT3AP56704 UBE2SP1-201ENST00000450587 669 ntBASIC19.4■□□□□ 0.7
WNT3AP56704 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
WNT3AP56704 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.4■□□□□ 0.7
WNT3AP56704 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
WNT3AP56704 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
WNT3AP56704 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.4■□□□□ 0.7
WNT3AP56704 AC073195.1-201ENST00000607241 877 ntBASIC19.4■□□□□ 0.7
WNT3AP56704 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.4■□□□□ 0.7
WNT3AP56704 TMEM191A-211ENST00000637163 1067 ntBASIC19.4■□□□□ 0.7
WNT3AP56704 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
WNT3AP56704 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.4■□□□□ 0.7
WNT3AP56704 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
WNT3AP56704 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
WNT3AP56704 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
WNT3AP56704 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
WNT3AP56704 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
WNT3AP56704 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
WNT3AP56704 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
WNT3AP56704 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.4■□□□□ 0.7
WNT3AP56704 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
WNT3AP56704 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
WNT3AP56704 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.39■□□□□ 0.7
WNT3AP56704 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
WNT3AP56704 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
WNT3AP56704 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
WNT3AP56704 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.39■□□□□ 0.69
WNT3AP56704 AL049812.1-201ENST00000432563 2267 ntBASIC19.39■□□□□ 0.69
WNT3AP56704 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.39■□□□□ 0.69
WNT3AP56704 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
WNT3AP56704 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
WNT3AP56704 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
WNT3AP56704 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
WNT3AP56704 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
WNT3AP56704 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.39■□□□□ 0.69
WNT3AP56704 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
WNT3AP56704 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.39■□□□□ 0.69
WNT3AP56704 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.39■□□□□ 0.69
WNT3AP56704 CR392000.1-201ENST00000624770 1228 ntBASIC19.39■□□□□ 0.69
WNT3AP56704 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
WNT3AP56704 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.39■□□□□ 0.69
WNT3AP56704 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
WNT3AP56704 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
WNT3AP56704 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.39■□□□□ 0.69
WNT3AP56704 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.39■□□□□ 0.69
WNT3AP56704 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
WNT3AP56704 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
WNT3AP56704 IRX1P1-201ENST00000438849 1838 ntBASIC19.39■□□□□ 0.69
WNT3AP56704 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
WNT3AP56704 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
WNT3AP56704 AC120498.9-201ENST00000339021 3867 ntBASIC19.39■□□□□ 0.69
WNT3AP56704 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
WNT3AP56704 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
WNT3AP56704 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
WNT3AP56704 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
WNT3AP56704 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
WNT3AP56704 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
WNT3AP56704 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
WNT3AP56704 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
WNT3AP56704 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
WNT3AP56704 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
WNT3AP56704 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
WNT3AP56704 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
WNT3AP56704 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
WNT3AP56704 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
WNT3AP56704 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
WNT3AP56704 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
WNT3AP56704 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
WNT3AP56704 KRT16P1-201ENST00000399124 1418 ntBASIC19.38■□□□□ 0.69
WNT3AP56704 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
WNT3AP56704 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.38■□□□□ 0.69
WNT3AP56704 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.38■□□□□ 0.69
WNT3AP56704 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
WNT3AP56704 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.38■□□□□ 0.69
WNT3AP56704 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.38■□□□□ 0.69
WNT3AP56704 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.38■□□□□ 0.69
WNT3AP56704 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.38■□□□□ 0.69
WNT3AP56704 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.38■□□□□ 0.69
WNT3AP56704 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.38■□□□□ 0.69
WNT3AP56704 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
WNT3AP56704 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
WNT3AP56704 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
WNT3AP56704 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
WNT3AP56704 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
WNT3AP56704 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
WNT3AP56704 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
WNT3AP56704 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
WNT3AP56704 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
WNT3AP56704 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
WNT3AP56704 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.37■□□□□ 0.69
WNT3AP56704 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
WNT3AP56704 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
WNT3AP56704 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
WNT3AP56704 AL135905.2-201ENST00000584934 1404 ntBASIC19.37■□□□□ 0.69
WNT3AP56704 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms