Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC25A1P53007 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC25A1P53007 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC25A1P53007 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC25A1P53007 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SLC25A1P53007 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC25A1P53007 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC25A1P53007 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC25A1P53007 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC25A1P53007 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SLC25A1P53007 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC25A1P53007 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC25A1P53007 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC25A1P53007 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC25A1P53007 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC25A1P53007 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC25A1P53007 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC25A1P53007 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC25A1P53007 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC25A1P53007 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC25A1P53007 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC25A1P53007 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC25A1P53007 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC25A1P53007 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC25A1P53007 TSPY21P-201ENST00000433481 731 ntBASIC17.05■□□□□ 0.32
SLC25A1P53007 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SLC25A1P53007 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC25A1P53007 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC25A1P53007 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC25A1P53007 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC25A1P53007 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC25A1P53007 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SLC25A1P53007 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC25A1P53007 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.05■□□□□ 0.32
SLC25A1P53007 AC083906.6-201ENST00000641366 219 ntBASIC17.05■□□□□ 0.32
SLC25A1P53007 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC25A1P53007 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC25A1P53007 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC25A1P53007 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC25A1P53007 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC25A1P53007 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC25A1P53007 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC25A1P53007 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC25A1P53007 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC25A1P53007 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC25A1P53007 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
SLC25A1P53007 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC25A1P53007 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC25A1P53007 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC25A1P53007 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC25A1P53007 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC25A1P53007 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
SLC25A1P53007 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC25A1P53007 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC25A1P53007 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC25A1P53007 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC25A1P53007 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC25A1P53007 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC25A1P53007 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC25A1P53007 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC25A1P53007 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC25A1P53007 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC25A1P53007 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SLC25A1P53007 AC142086.2-201ENST00000569753 217 ntBASIC17.04■□□□□ 0.32
SLC25A1P53007 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC25A1P53007 AL109923.1-201ENST00000618799 583 ntBASIC17.04■□□□□ 0.32
SLC25A1P53007 NEFHP1-201ENST00000412845 2629 ntBASIC17.04■□□□□ 0.32
SLC25A1P53007 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC25A1P53007 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC25A1P53007 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC25A1P53007 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SLC25A1P53007 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC25A1P53007 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC25A1P53007 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC25A1P53007 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC25A1P53007 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC25A1P53007 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC25A1P53007 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC25A1P53007 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SLC25A1P53007 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC25A1P53007 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.03■□□□□ 0.32
SLC25A1P53007 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SLC25A1P53007 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.03■□□□□ 0.32
SLC25A1P53007 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC25A1P53007 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC25A1P53007 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC25A1P53007 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC25A1P53007 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SLC25A1P53007 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SLC25A1P53007 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC25A1P53007 POM121L13P-201ENST00000422362 380 ntBASIC17.03■□□□□ 0.32
SLC25A1P53007 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.03■□□□□ 0.32
SLC25A1P53007 PRKY-204ENST00000533551 1019 ntBASIC17.03■□□□□ 0.32
SLC25A1P53007 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SLC25A1P53007 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SLC25A1P53007 AC079598.2-202ENST00000546624 1451 ntBASIC17.03■□□□□ 0.32
SLC25A1P53007 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC25A1P53007 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SLC25A1P53007 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SLC25A1P53007 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms