Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGA2P52926 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGA2P52926 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGA2P52926 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HMGA2P52926 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGA2P52926 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.53■□□□□ 0.4
HMGA2P52926 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.53■□□□□ 0.4
HMGA2P52926 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HMGA2P52926 AC022517.1-201ENST00000592429 346 ntBASIC17.53■□□□□ 0.4
HMGA2P52926 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGA2P52926 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGA2P52926 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGA2P52926 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGA2P52926 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
HMGA2P52926 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGA2P52926 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGA2P52926 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGA2P52926 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGA2P52926 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGA2P52926 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGA2P52926 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGA2P52926 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.52■□□□□ 0.4
HMGA2P52926 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
HMGA2P52926 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGA2P52926 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.52■□□□□ 0.4
HMGA2P52926 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGA2P52926 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGA2P52926 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGA2P52926 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGA2P52926 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGA2P52926 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGA2P52926 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGA2P52926 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGA2P52926 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
HMGA2P52926 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGA2P52926 TUBB8P6-201ENST00000436895 1288 ntBASIC17.52■□□□□ 0.4
HMGA2P52926 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGA2P52926 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HMGA2P52926 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.52■□□□□ 0.4
HMGA2P52926 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.52■□□□□ 0.39
HMGA2P52926 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.52■□□□□ 0.39
HMGA2P52926 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGA2P52926 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HMGA2P52926 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGA2P52926 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGA2P52926 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.52■□□□□ 0.39
HMGA2P52926 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGA2P52926 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.52■□□□□ 0.39
HMGA2P52926 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGA2P52926 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGA2P52926 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGA2P52926 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGA2P52926 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGA2P52926 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
HMGA2P52926 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGA2P52926 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGA2P52926 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HMGA2P52926 MIPEPP3-201ENST00000412105 444 ntBASIC17.51■□□□□ 0.39
HMGA2P52926 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
HMGA2P52926 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
HMGA2P52926 AL162430.1-201ENST00000480705 870 ntBASIC17.51■□□□□ 0.39
HMGA2P52926 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.51■□□□□ 0.39
HMGA2P52926 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGA2P52926 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGA2P52926 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGA2P52926 AC073592.3-201ENST00000625118 1834 ntBASIC17.51■□□□□ 0.39
HMGA2P52926 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGA2P52926 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.51■□□□□ 0.39
HMGA2P52926 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGA2P52926 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGA2P52926 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA2P52926 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA2P52926 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA2P52926 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA2P52926 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA2P52926 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA2P52926 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA2P52926 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGA2P52926 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGA2P52926 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HMGA2P52926 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HMGA2P52926 DUSP5P2-201ENST00000426873 1033 ntBASIC17.5■□□□□ 0.39
HMGA2P52926 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGA2P52926 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGA2P52926 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
HMGA2P52926 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGA2P52926 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGA2P52926 AC080038.1-201ENST00000611274 1154 ntBASIC17.5■□□□□ 0.39
HMGA2P52926 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.5■□□□□ 0.39
HMGA2P52926 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA2P52926 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA2P52926 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA2P52926 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA2P52926 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA2P52926 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA2P52926 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMGA2P52926 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
HMGA2P52926 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.5■□□□□ 0.39
HMGA2P52926 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMGA2P52926 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms