Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GTF2A1P52655 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GTF2A1P52655 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.84■□□□□ 0.61
GTF2A1P52655 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GTF2A1P52655 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.84■□□□□ 0.61
GTF2A1P52655 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.84■□□□□ 0.61
GTF2A1P52655 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GTF2A1P52655 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
GTF2A1P52655 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
GTF2A1P52655 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GTF2A1P52655 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GTF2A1P52655 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.83■□□□□ 0.61
GTF2A1P52655 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
GTF2A1P52655 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
GTF2A1P52655 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
GTF2A1P52655 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.83■□□□□ 0.61
GTF2A1P52655 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GTF2A1P52655 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
GTF2A1P52655 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GTF2A1P52655 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
GTF2A1P52655 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC18.83■□□□□ 0.6
GTF2A1P52655 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GTF2A1P52655 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GTF2A1P52655 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.83■□□□□ 0.6
GTF2A1P52655 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GTF2A1P52655 CROCCP2-202ENST00000412962 2773 ntBASIC18.83■□□□□ 0.6
GTF2A1P52655 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GTF2A1P52655 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GTF2A1P52655 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.83■□□□□ 0.6
GTF2A1P52655 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
GTF2A1P52655 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
GTF2A1P52655 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GTF2A1P52655 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.83■□□□□ 0.6
GTF2A1P52655 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GTF2A1P52655 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GTF2A1P52655 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
GTF2A1P52655 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.82■□□□□ 0.6
GTF2A1P52655 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
GTF2A1P52655 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.82■□□□□ 0.6
GTF2A1P52655 TSPY9P-201ENST00000440215 945 ntBASIC18.82■□□□□ 0.6
GTF2A1P52655 TSPY11P-201ENST00000442607 1045 ntBASIC18.82■□□□□ 0.6
GTF2A1P52655 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.82■□□□□ 0.6
GTF2A1P52655 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.82■□□□□ 0.6
GTF2A1P52655 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 AC022211.2-201ENST00000585075 2527 ntBASIC18.82■□□□□ 0.6
GTF2A1P52655 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.82■□□□□ 0.6
GTF2A1P52655 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GTF2A1P52655 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GTF2A1P52655 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.81■□□□□ 0.6
GTF2A1P52655 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF2A1P52655 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.81■□□□□ 0.6
GTF2A1P52655 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF2A1P52655 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.81■□□□□ 0.6
GTF2A1P52655 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF2A1P52655 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF2A1P52655 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF2A1P52655 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF2A1P52655 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF2A1P52655 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GTF2A1P52655 AC006455.2-201ENST00000429931 906 ntBASIC18.81■□□□□ 0.6
GTF2A1P52655 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.81■□□□□ 0.6
GTF2A1P52655 Z92544.1-202ENST00000571933 1220 ntBASIC18.81■□□□□ 0.6
GTF2A1P52655 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.81■□□□□ 0.6
GTF2A1P52655 AL117332.1-201ENST00000622628 974 ntBASIC18.81■□□□□ 0.6
GTF2A1P52655 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF2A1P52655 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.81■□□□□ 0.6
GTF2A1P52655 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.81■□□□□ 0.6
GTF2A1P52655 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GTF2A1P52655 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.81■□□□□ 0.6
GTF2A1P52655 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.81■□□□□ 0.6
GTF2A1P52655 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.81■□□□□ 0.6
GTF2A1P52655 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF2A1P52655 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF2A1P52655 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
GTF2A1P52655 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GTF2A1P52655 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GTF2A1P52655 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF2A1P52655 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GTF2A1P52655 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
GTF2A1P52655 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
GTF2A1P52655 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GTF2A1P52655 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms