Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RNF144AP50876 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF144AP50876 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF144AP50876 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
RNF144AP50876 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF144AP50876 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF144AP50876 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF144AP50876 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF144AP50876 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RNF144AP50876 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF144AP50876 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RNF144AP50876 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RNF144AP50876 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF144AP50876 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF144AP50876 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF144AP50876 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF144AP50876 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF144AP50876 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF144AP50876 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF144AP50876 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF144AP50876 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF144AP50876 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF144AP50876 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF144AP50876 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF144AP50876 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF144AP50876 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF144AP50876 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RNF144AP50876 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
RNF144AP50876 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RNF144AP50876 AC104417.2-201ENST00000562989 1793 ntBASIC17.81■□□□□ 0.44
RNF144AP50876 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF144AP50876 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RNF144AP50876 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF144AP50876 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF144AP50876 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF144AP50876 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF144AP50876 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF144AP50876 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF144AP50876 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF144AP50876 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF144AP50876 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF144AP50876 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RNF144AP50876 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RNF144AP50876 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF144AP50876 RN7SL471P-201ENST00000580476 299 ntBASIC17.81■□□□□ 0.44
RNF144AP50876 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RNF144AP50876 AC124016.1-201ENST00000609552 612 ntBASIC17.81■□□□□ 0.44
RNF144AP50876 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF144AP50876 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF144AP50876 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RNF144AP50876 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF144AP50876 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF144AP50876 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RNF144AP50876 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
RNF144AP50876 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF144AP50876 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF144AP50876 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF144AP50876 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF144AP50876 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RNF144AP50876 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF144AP50876 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF144AP50876 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF144AP50876 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF144AP50876 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF144AP50876 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF144AP50876 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF144AP50876 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
RNF144AP50876 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RNF144AP50876 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
RNF144AP50876 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF144AP50876 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF144AP50876 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF144AP50876 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF144AP50876 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF144AP50876 KRT18P29-201ENST00000397031 1267 ntBASIC17.8■□□□□ 0.44
RNF144AP50876 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF144AP50876 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF144AP50876 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF144AP50876 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RNF144AP50876 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF144AP50876 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF144AP50876 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF144AP50876 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF144AP50876 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RNF144AP50876 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF144AP50876 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF144AP50876 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF144AP50876 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF144AP50876 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF144AP50876 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF144AP50876 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF144AP50876 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF144AP50876 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.79■□□□□ 0.44
RNF144AP50876 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF144AP50876 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF144AP50876 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF144AP50876 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF144AP50876 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.79■□□□□ 0.44
RNF144AP50876 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF144AP50876 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms