Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A12P48065 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SLC6A12P48065 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.54■□□□□ 0.56
SLC6A12P48065 AC098590.1-201ENST00000468126 897 ntBASIC18.54■□□□□ 0.56
SLC6A12P48065 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.54■□□□□ 0.56
SLC6A12P48065 AC131212.4-201ENST00000623606 975 ntBASIC18.54■□□□□ 0.56
SLC6A12P48065 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC6A12P48065 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
SLC6A12P48065 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A12P48065 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SLC6A12P48065 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A12P48065 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A12P48065 AC093503.3-201ENST00000624917 2352 ntBASIC18.54■□□□□ 0.56
SLC6A12P48065 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.54■□□□□ 0.56
SLC6A12P48065 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SLC6A12P48065 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A12P48065 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A12P48065 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A12P48065 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A12P48065 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A12P48065 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A12P48065 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A12P48065 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A12P48065 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A12P48065 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A12P48065 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A12P48065 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC6A12P48065 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SLC6A12P48065 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SLC6A12P48065 AF186192.3-201ENST00000583427 947 ntBASIC18.53■□□□□ 0.56
SLC6A12P48065 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SLC6A12P48065 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC6A12P48065 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.53■□□□□ 0.56
SLC6A12P48065 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
SLC6A12P48065 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A12P48065 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC6A12P48065 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.53■□□□□ 0.56
SLC6A12P48065 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SLC6A12P48065 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.53■□□□□ 0.56
SLC6A12P48065 CROCCP3-202ENST00000420820 1947 ntBASIC18.53■□□□□ 0.56
SLC6A12P48065 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A12P48065 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SLC6A12P48065 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.52■□□□□ 0.56
SLC6A12P48065 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A12P48065 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A12P48065 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A12P48065 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SLC6A12P48065 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A12P48065 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC6A12P48065 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.52■□□□□ 0.56
SLC6A12P48065 AC004408.2-201ENST00000623613 2777 ntBASIC18.52■□□□□ 0.56
SLC6A12P48065 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A12P48065 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A12P48065 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SLC6A12P48065 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A12P48065 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A12P48065 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.52■□□□□ 0.56
SLC6A12P48065 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.52■□□□□ 0.56
SLC6A12P48065 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A12P48065 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A12P48065 FAM197Y4-202ENST00000622692 608 ntBASIC18.52■□□□□ 0.56
SLC6A12P48065 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.52■□□□□ 0.56
SLC6A12P48065 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A12P48065 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A12P48065 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SLC6A12P48065 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC6A12P48065 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.52■□□□□ 0.56
SLC6A12P48065 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC6A12P48065 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.52■□□□□ 0.55
SLC6A12P48065 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
SLC6A12P48065 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC6A12P48065 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC6A12P48065 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SLC6A12P48065 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC6A12P48065 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC6A12P48065 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC6A12P48065 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A12P48065 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A12P48065 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC6A12P48065 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A12P48065 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A12P48065 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A12P48065 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC6A12P48065 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.51■□□□□ 0.55
SLC6A12P48065 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC6A12P48065 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A12P48065 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A12P48065 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC6A12P48065 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC6A12P48065 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A12P48065 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC6A12P48065 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SLC6A12P48065 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A12P48065 KRT16P1-201ENST00000399124 1418 ntBASIC18.5■□□□□ 0.55
SLC6A12P48065 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A12P48065 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC6A12P48065 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A12P48065 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A12P48065 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC6A12P48065 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms