Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
RPL13AP40429 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
RPL13AP40429 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL13AP40429 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.24□□□□□ -0.29
RPL13AP40429 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RPL13AP40429 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL13AP40429 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC13.24□□□□□ -0.29
RPL13AP40429 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC13.24□□□□□ -0.29
RPL13AP40429 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL13AP40429 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL13AP40429 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC13.24□□□□□ -0.29
RPL13AP40429 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RPL13AP40429 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC13.24□□□□□ -0.29
RPL13AP40429 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.24□□□□□ -0.29
RPL13AP40429 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL13AP40429 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL13AP40429 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL13AP40429 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.24□□□□□ -0.29
RPL13AP40429 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.24□□□□□ -0.29
RPL13AP40429 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL13AP40429 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
RPL13AP40429 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL13AP40429 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RPL13AP40429 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC13.24□□□□□ -0.29
RPL13AP40429 EXOC3-AS1-202ENST00000623673 1663 ntBASIC13.24□□□□□ -0.29
RPL13AP40429 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL13AP40429 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL13AP40429 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RPL13AP40429 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
RPL13AP40429 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.24□□□□□ -0.29
RPL13AP40429 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL13AP40429 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL13AP40429 BX005040.4-201ENST00000637145 1518 ntBASIC13.23□□□□□ -0.29
RPL13AP40429 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.23□□□□□ -0.29
RPL13AP40429 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL13AP40429 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RPL13AP40429 RASA4CP-201ENST00000424092 1398 ntBASIC13.23□□□□□ -0.29
RPL13AP40429 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC13.23□□□□□ -0.29
RPL13AP40429 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL13AP40429 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL13AP40429 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RPL13AP40429 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC13.23□□□□□ -0.29
RPL13AP40429 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL13AP40429 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL13AP40429 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RPL13AP40429 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC13.23□□□□□ -0.29
RPL13AP40429 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RPL13AP40429 MIR3181-201ENST00000578512 73 ntBASIC13.23□□□□□ -0.29
RPL13AP40429 pRNA.6-201ENST00000610482 90 ntBASIC13.23□□□□□ -0.29
RPL13AP40429 pRNA.5-201ENST00000612139 90 ntBASIC13.23□□□□□ -0.29
RPL13AP40429 pRNA.11-201ENST00000618423 90 ntBASIC13.23□□□□□ -0.29
RPL13AP40429 pRNA.13-201ENST00000619112 90 ntBASIC13.23□□□□□ -0.29
RPL13AP40429 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RPL13AP40429 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RPL13AP40429 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL13AP40429 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RPL13AP40429 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RPL13AP40429 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.23□□□□□ -0.29
RPL13AP40429 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RPL13AP40429 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.23□□□□□ -0.29
RPL13AP40429 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RPL13AP40429 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.22□□□□□ -0.29
RPL13AP40429 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC13.22□□□□□ -0.29
RPL13AP40429 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC13.22□□□□□ -0.29
RPL13AP40429 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.22□□□□□ -0.29
RPL13AP40429 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC13.22□□□□□ -0.29
RPL13AP40429 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RPL13AP40429 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC13.22□□□□□ -0.29
RPL13AP40429 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 MIR939-201ENST00000401314 82 ntBASIC13.22□□□□□ -0.29
RPL13AP40429 BX842568.3-201ENST00000418104 571 ntBASIC13.22□□□□□ -0.29
RPL13AP40429 SUDS3P1-201ENST00000505831 966 ntBASIC13.22□□□□□ -0.29
RPL13AP40429 AP001330.3-201ENST00000520123 633 ntBASIC13.22□□□□□ -0.29
RPL13AP40429 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RPL13AP40429 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC13.22□□□□□ -0.29
RPL13AP40429 AF213884.3-201ENST00000563833 479 ntBASIC13.22□□□□□ -0.29
RPL13AP40429 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC13.22□□□□□ -0.29
RPL13AP40429 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC13.22□□□□□ -0.29
RPL13AP40429 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
RPL13AP40429 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RPL13AP40429 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
RPL13AP40429 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms