Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTPN7P35236 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN7P35236 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PTPN7P35236 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN7P35236 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN7P35236 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN7P35236 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN7P35236 AL355802.2-201ENST00000402069 882 ntBASIC19.85■□□□□ 0.77
PTPN7P35236 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.85■□□□□ 0.77
PTPN7P35236 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.85■□□□□ 0.77
PTPN7P35236 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.85■□□□□ 0.77
PTPN7P35236 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPN7P35236 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN7P35236 AL160286.2-201ENST00000567150 934 ntBASIC19.85■□□□□ 0.77
PTPN7P35236 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPN7P35236 MTDHP1-201ENST00000605323 784 ntBASIC19.85■□□□□ 0.77
PTPN7P35236 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN7P35236 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.85■□□□□ 0.77
PTPN7P35236 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN7P35236 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN7P35236 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN7P35236 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPN7P35236 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPN7P35236 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN7P35236 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN7P35236 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
PTPN7P35236 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN7P35236 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN7P35236 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN7P35236 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN7P35236 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
PTPN7P35236 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN7P35236 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.84■□□□□ 0.77
PTPN7P35236 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN7P35236 AP003097.1-201ENST00000530657 1135 ntBASIC19.84■□□□□ 0.77
PTPN7P35236 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.84■□□□□ 0.77
PTPN7P35236 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.84■□□□□ 0.77
PTPN7P35236 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN7P35236 AC069544.1-201ENST00000609399 999 ntBASIC19.84■□□□□ 0.77
PTPN7P35236 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN7P35236 AC083906.6-201ENST00000641366 219 ntBASIC19.84■□□□□ 0.77
PTPN7P35236 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PTPN7P35236 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
PTPN7P35236 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.84■□□□□ 0.77
PTPN7P35236 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PTPN7P35236 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN7P35236 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN7P35236 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.83■□□□□ 0.77
PTPN7P35236 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN7P35236 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN7P35236 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.83■□□□□ 0.77
PTPN7P35236 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN7P35236 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN7P35236 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN7P35236 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN7P35236 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN7P35236 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN7P35236 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN7P35236 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN7P35236 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN7P35236 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PTPN7P35236 HLA-L-209ENST00000420110 1011 ntBASIC19.83■□□□□ 0.77
PTPN7P35236 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.83■□□□□ 0.77
PTPN7P35236 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN7P35236 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.83■□□□□ 0.77
PTPN7P35236 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.83■□□□□ 0.77
PTPN7P35236 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.77
PTPN7P35236 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.83■□□□□ 0.77
PTPN7P35236 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN7P35236 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.83■□□□□ 0.76
PTPN7P35236 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
PTPN7P35236 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN7P35236 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN7P35236 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN7P35236 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PTPN7P35236 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PTPN7P35236 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN7P35236 AL512353.2-201ENST00000448759 1962 ntBASIC19.83■□□□□ 0.76
PTPN7P35236 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN7P35236 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.83■□□□□ 0.76
PTPN7P35236 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN7P35236 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
PTPN7P35236 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN7P35236 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.82■□□□□ 0.76
PTPN7P35236 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN7P35236 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.82■□□□□ 0.76
PTPN7P35236 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN7P35236 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPN7P35236 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PTPN7P35236 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.82■□□□□ 0.76
PTPN7P35236 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN7P35236 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN7P35236 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.82■□□□□ 0.76
PTPN7P35236 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.82■□□□□ 0.76
PTPN7P35236 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPN7P35236 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.82■□□□□ 0.76
PTPN7P35236 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN7P35236 AC004264.1-201ENST00000608354 794 ntBASIC19.82■□□□□ 0.76
PTPN7P35236 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN7P35236 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms