Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 TEX21P-204ENST00000641479 1693 ntBASIC14.13□□□□□ -0.15
CKS2P33552 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.13□□□□□ -0.15
CKS2P33552 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CKS2P33552 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CKS2P33552 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CKS2P33552 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.13□□□□□ -0.15
CKS2P33552 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.13□□□□□ -0.15
CKS2P33552 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.13□□□□□ -0.15
CKS2P33552 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CKS2P33552 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.13□□□□□ -0.15
CKS2P33552 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CKS2P33552 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
CKS2P33552 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CKS2P33552 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.12□□□□□ -0.15
CKS2P33552 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CKS2P33552 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CKS2P33552 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.12□□□□□ -0.15
CKS2P33552 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.12□□□□□ -0.15
CKS2P33552 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC14.12□□□□□ -0.15
CKS2P33552 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.12□□□□□ -0.15
CKS2P33552 AL354811.1-201ENST00000610286 706 ntBASIC14.12□□□□□ -0.15
CKS2P33552 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 AC093525.10-201ENST00000625130 1569 ntBASIC14.12□□□□□ -0.15
CKS2P33552 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.12□□□□□ -0.15
CKS2P33552 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CKS2P33552 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.12□□□□□ -0.15
CKS2P33552 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CKS2P33552 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.11□□□□□ -0.15
CKS2P33552 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CKS2P33552 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.11□□□□□ -0.15
CKS2P33552 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.11□□□□□ -0.15
CKS2P33552 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CKS2P33552 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CKS2P33552 AL136116.3-201ENST00000402907 1138 ntBASIC14.11□□□□□ -0.15
CKS2P33552 MTURN-203ENST00000409688 843 ntTSL 2 BASIC14.11□□□□□ -0.15
CKS2P33552 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
CKS2P33552 AL356441.2-201ENST00000443009 864 ntBASIC14.11□□□□□ -0.15
CKS2P33552 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.11□□□□□ -0.15
CKS2P33552 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.11□□□□□ -0.15
CKS2P33552 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.11□□□□□ -0.15
CKS2P33552 KRT18P20-201ENST00000548986 1279 ntBASIC14.11□□□□□ -0.15
CKS2P33552 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.11□□□□□ -0.15
CKS2P33552 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.11□□□□□ -0.15
CKS2P33552 AP001160.3-201ENST00000601484 763 ntBASIC14.11□□□□□ -0.15
CKS2P33552 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC14.11□□□□□ -0.15
CKS2P33552 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.11□□□□□ -0.15
CKS2P33552 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CKS2P33552 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.11□□□□□ -0.15
CKS2P33552 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CKS2P33552 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CKS2P33552 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
CKS2P33552 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms