Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.22■□□□□ 0.83
CHRNA3P32297 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.22■□□□□ 0.83
CHRNA3P32297 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRNA3P32297 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.22■□□□□ 0.83
CHRNA3P32297 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.22■□□□□ 0.83
CHRNA3P32297 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRNA3P32297 AL023875.1-201ENST00000640777 796 ntBASIC20.22■□□□□ 0.83
CHRNA3P32297 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRNA3P32297 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CHRNA3P32297 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRNA3P32297 TEX21P-204ENST00000641479 1693 ntBASIC20.22■□□□□ 0.83
CHRNA3P32297 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CHRNA3P32297 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRNA3P32297 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CHRNA3P32297 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.22■□□□□ 0.83
CHRNA3P32297 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CHRNA3P32297 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CHRNA3P32297 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA3P32297 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CHRNA3P32297 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA3P32297 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
CHRNA3P32297 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA3P32297 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA3P32297 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CHRNA3P32297 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CHRNA3P32297 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.21■□□□□ 0.83
CHRNA3P32297 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA3P32297 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CHRNA3P32297 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.21■□□□□ 0.83
CHRNA3P32297 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA3P32297 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.21■□□□□ 0.83
CHRNA3P32297 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CHRNA3P32297 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.21■□□□□ 0.83
CHRNA3P32297 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA3P32297 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA3P32297 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA3P32297 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.21■□□□□ 0.83
CHRNA3P32297 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CHRNA3P32297 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA3P32297 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA3P32297 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CHRNA3P32297 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA3P32297 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CHRNA3P32297 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA3P32297 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRNA3P32297 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CHRNA3P32297 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.21■□□□□ 0.83
CHRNA3P32297 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
CHRNA3P32297 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CHRNA3P32297 AC006333.2-201ENST00000607957 2099 ntBASIC20.2■□□□□ 0.82
CHRNA3P32297 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.2■□□□□ 0.82
CHRNA3P32297 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRNA3P32297 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CHRNA3P32297 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRNA3P32297 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.2■□□□□ 0.82
CHRNA3P32297 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHRNA3P32297 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRNA3P32297 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CHRNA3P32297 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHRNA3P32297 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.2■□□□□ 0.82
CHRNA3P32297 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.2■□□□□ 0.82
CHRNA3P32297 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.2■□□□□ 0.82
CHRNA3P32297 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.2■□□□□ 0.82
CHRNA3P32297 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHRNA3P32297 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRNA3P32297 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRNA3P32297 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.2■□□□□ 0.82
CHRNA3P32297 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRNA3P32297 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.2■□□□□ 0.82
CHRNA3P32297 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.2■□□□□ 0.82
CHRNA3P32297 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHRNA3P32297 AL049812.1-201ENST00000432563 2267 ntBASIC20.2■□□□□ 0.82
CHRNA3P32297 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRNA3P32297 AC124283.5-201ENST00000624661 1809 ntBASIC20.2■□□□□ 0.82
CHRNA3P32297 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRNA3P32297 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRNA3P32297 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CHRNA3P32297 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHRNA3P32297 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CHRNA3P32297 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRNA3P32297 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CHRNA3P32297 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHRNA3P32297 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRNA3P32297 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.19■□□□□ 0.82
CHRNA3P32297 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CHRNA3P32297 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRNA3P32297 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRNA3P32297 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHRNA3P32297 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRNA3P32297 AC239809.2-201ENST00000415381 517 ntBASIC20.19■□□□□ 0.82
CHRNA3P32297 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.19■□□□□ 0.82
CHRNA3P32297 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.19■□□□□ 0.82
CHRNA3P32297 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CHRNA3P32297 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.19■□□□□ 0.82
CHRNA3P32297 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.19■□□□□ 0.82
CHRNA3P32297 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.19■□□□□ 0.82
CHRNA3P32297 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.19■□□□□ 0.82
CHRNA3P32297 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.19■□□□□ 0.82
CHRNA3P32297 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CHRNA3P32297 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms