Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHRNA5P30532 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHRNA5P30532 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CHRNA5P30532 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHRNA5P30532 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC23.62■■□□□ 1.37
CHRNA5P30532 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.62■■□□□ 1.37
CHRNA5P30532 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CHRNA5P30532 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHRNA5P30532 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
CHRNA5P30532 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CHRNA5P30532 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CHRNA5P30532 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHRNA5P30532 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC23.62■■□□□ 1.37
CHRNA5P30532 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC23.62■■□□□ 1.37
CHRNA5P30532 DRAXINP1-201ENST00000437611 948 ntBASIC23.62■■□□□ 1.37
CHRNA5P30532 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC23.62■■□□□ 1.37
CHRNA5P30532 RNF126P1-202ENST00000569893 925 ntBASIC23.62■■□□□ 1.37
CHRNA5P30532 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC23.62■■□□□ 1.37
CHRNA5P30532 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHRNA5P30532 SPEG-225ENST00000617028 815 ntTSL 5 BASIC23.62■■□□□ 1.37
CHRNA5P30532 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHRNA5P30532 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHRNA5P30532 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CHRNA5P30532 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHRNA5P30532 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHRNA5P30532 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHRNA5P30532 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CHRNA5P30532 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.61■■□□□ 1.37
CHRNA5P30532 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHRNA5P30532 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC23.61■■□□□ 1.37
CHRNA5P30532 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CHRNA5P30532 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC23.61■■□□□ 1.37
CHRNA5P30532 HLA-F-220ENST00000434407 884 ntBASIC23.61■■□□□ 1.37
CHRNA5P30532 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHRNA5P30532 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CHRNA5P30532 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC23.61■■□□□ 1.37
CHRNA5P30532 AL157888.1-201ENST00000631930 593 ntBASIC23.61■■□□□ 1.37
CHRNA5P30532 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHRNA5P30532 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
CHRNA5P30532 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CHRNA5P30532 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.6■■□□□ 1.37
CHRNA5P30532 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHRNA5P30532 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CHRNA5P30532 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC23.6■■□□□ 1.37
CHRNA5P30532 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
CHRNA5P30532 TOB2P1-201ENST00000469761 992 ntBASIC23.6■■□□□ 1.37
CHRNA5P30532 NAA38-203ENST00000575071 553 ntTSL 2 BASIC23.6■■□□□ 1.37
CHRNA5P30532 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
CHRNA5P30532 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CHRNA5P30532 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.6■■□□□ 1.37
CHRNA5P30532 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.6■■□□□ 1.37
CHRNA5P30532 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CHRNA5P30532 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.59■■□□□ 1.37
CHRNA5P30532 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.59■■□□□ 1.37
CHRNA5P30532 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHRNA5P30532 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHRNA5P30532 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.59■■□□□ 1.37
CHRNA5P30532 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHRNA5P30532 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
CHRNA5P30532 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
CHRNA5P30532 SEC1P-202ENST00000473944 940 ntBASIC23.59■■□□□ 1.37
CHRNA5P30532 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC23.59■■□□□ 1.37
CHRNA5P30532 CALM3-211ENST00000598871 561 ntTSL 4 BASIC23.59■■□□□ 1.37
CHRNA5P30532 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHRNA5P30532 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.59■■□□□ 1.37
CHRNA5P30532 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHRNA5P30532 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.59■■□□□ 1.37
CHRNA5P30532 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHRNA5P30532 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHRNA5P30532 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHRNA5P30532 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHRNA5P30532 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHRNA5P30532 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.58■■□□□ 1.37
CHRNA5P30532 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC23.58■■□□□ 1.37
CHRNA5P30532 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHRNA5P30532 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.58■■□□□ 1.37
CHRNA5P30532 MIR662-201ENST00000384847 95 ntBASIC23.58■■□□□ 1.37
CHRNA5P30532 BMF-207ENST00000559701 630 ntTSL 3 BASIC23.58■■□□□ 1.37
CHRNA5P30532 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC23.58■■□□□ 1.37
CHRNA5P30532 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHRNA5P30532 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC23.58■■□□□ 1.37
CHRNA5P30532 AC139530.3-201ENST00000620344 690 ntBASIC23.58■■□□□ 1.37
CHRNA5P30532 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
CHRNA5P30532 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHRNA5P30532 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHRNA5P30532 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.36
CHRNA5P30532 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.58■■□□□ 1.36
CHRNA5P30532 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CHRNA5P30532 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
CHRNA5P30532 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CHRNA5P30532 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CHRNA5P30532 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC23.57■■□□□ 1.36
CHRNA5P30532 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CHRNA5P30532 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.57■■□□□ 1.36
CHRNA5P30532 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
CHRNA5P30532 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.57■■□□□ 1.36
CHRNA5P30532 AL136038.4-201ENST00000603606 1261 ntBASIC23.57■■□□□ 1.36
CHRNA5P30532 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHRNA5P30532 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC23.57■■□□□ 1.36
CHRNA5P30532 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms