Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SHC1P29353 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SHC1P29353 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SHC1P29353 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
SHC1P29353 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SHC1P29353 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SHC1P29353 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SHC1P29353 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.58■□□□□ 0.4
SHC1P29353 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHC1P29353 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHC1P29353 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.58■□□□□ 0.4
SHC1P29353 UBE2SP1-201ENST00000450587 669 ntBASIC17.58■□□□□ 0.4
SHC1P29353 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.58■□□□□ 0.4
SHC1P29353 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SHC1P29353 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.58■□□□□ 0.4
SHC1P29353 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHC1P29353 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
SHC1P29353 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHC1P29353 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHC1P29353 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SHC1P29353 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHC1P29353 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHC1P29353 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SHC1P29353 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHC1P29353 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SHC1P29353 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SHC1P29353 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHC1P29353 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHC1P29353 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHC1P29353 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHC1P29353 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SHC1P29353 HTR7P1-201ENST00000538670 1336 ntBASIC17.57■□□□□ 0.4
SHC1P29353 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.57■□□□□ 0.4
SHC1P29353 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHC1P29353 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHC1P29353 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SHC1P29353 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHC1P29353 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.57■□□□□ 0.4
SHC1P29353 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHC1P29353 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SHC1P29353 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.57■□□□□ 0.4
SHC1P29353 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHC1P29353 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SHC1P29353 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHC1P29353 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SHC1P29353 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SHC1P29353 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.57■□□□□ 0.4
SHC1P29353 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SHC1P29353 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.57■□□□□ 0.4
SHC1P29353 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHC1P29353 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.56■□□□□ 0.4
SHC1P29353 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.56■□□□□ 0.4
SHC1P29353 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC1P29353 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SHC1P29353 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC1P29353 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.56■□□□□ 0.4
SHC1P29353 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHC1P29353 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.56■□□□□ 0.4
SHC1P29353 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC1P29353 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC1P29353 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.56■□□□□ 0.4
SHC1P29353 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC1P29353 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC1P29353 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.56■□□□□ 0.4
SHC1P29353 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHC1P29353 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC1P29353 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC1P29353 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC1P29353 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.56■□□□□ 0.4
SHC1P29353 C1QL1P1-201ENST00000568105 661 ntBASIC17.56■□□□□ 0.4
SHC1P29353 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.56■□□□□ 0.4
SHC1P29353 AC066615.1-201ENST00000640911 628 ntBASIC17.56■□□□□ 0.4
SHC1P29353 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC1P29353 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC1P29353 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC1P29353 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.56■□□□□ 0.4
SHC1P29353 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.56■□□□□ 0.4
SHC1P29353 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC1P29353 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.56■□□□□ 0.4
SHC1P29353 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC1P29353 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHC1P29353 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHC1P29353 KRT8P8-201ENST00000434750 1448 ntBASIC17.55■□□□□ 0.4
SHC1P29353 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC1P29353 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC1P29353 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.55■□□□□ 0.4
SHC1P29353 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHC1P29353 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC1P29353 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC1P29353 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC1P29353 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHC1P29353 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SHC1P29353 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.55■□□□□ 0.4
SHC1P29353 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.55■□□□□ 0.4
SHC1P29353 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.55■□□□□ 0.4
SHC1P29353 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.55■□□□□ 0.4
SHC1P29353 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.55■□□□□ 0.4
SHC1P29353 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SHC1P29353 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.55■□□□□ 0.4
SHC1P29353 Z99916.2-201ENST00000604037 246 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms