Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHA3P29320 AC005181.1-201ENST00000604782 1256 ntBASIC18.67■□□□□ 0.58
EPHA3P29320 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.67■□□□□ 0.58
EPHA3P29320 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
EPHA3P29320 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.67■□□□□ 0.58
EPHA3P29320 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
EPHA3P29320 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
EPHA3P29320 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.67■□□□□ 0.58
EPHA3P29320 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHA3P29320 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.67■□□□□ 0.58
EPHA3P29320 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.67■□□□□ 0.58
EPHA3P29320 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHA3P29320 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHA3P29320 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.67■□□□□ 0.58
EPHA3P29320 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHA3P29320 AC124283.5-201ENST00000624661 1809 ntBASIC18.67■□□□□ 0.58
EPHA3P29320 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHA3P29320 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
EPHA3P29320 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHA3P29320 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
EPHA3P29320 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
EPHA3P29320 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.66■□□□□ 0.58
EPHA3P29320 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA3P29320 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA3P29320 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA3P29320 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA3P29320 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.66■□□□□ 0.58
EPHA3P29320 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA3P29320 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
EPHA3P29320 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA3P29320 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.66■□□□□ 0.58
EPHA3P29320 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.66■□□□□ 0.58
EPHA3P29320 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.66■□□□□ 0.58
EPHA3P29320 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.66■□□□□ 0.58
EPHA3P29320 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA3P29320 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.66■□□□□ 0.58
EPHA3P29320 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.66■□□□□ 0.58
EPHA3P29320 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA3P29320 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA3P29320 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
EPHA3P29320 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.66■□□□□ 0.58
EPHA3P29320 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA3P29320 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA3P29320 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA3P29320 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.66■□□□□ 0.58
EPHA3P29320 BICD1-207ENST00000551848 1962 ntBASIC18.66■□□□□ 0.58
EPHA3P29320 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA3P29320 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA3P29320 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA3P29320 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA3P29320 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA3P29320 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EPHA3P29320 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.65■□□□□ 0.58
EPHA3P29320 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.65■□□□□ 0.58
EPHA3P29320 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.65■□□□□ 0.58
EPHA3P29320 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA3P29320 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA3P29320 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA3P29320 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.65■□□□□ 0.58
EPHA3P29320 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA3P29320 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA3P29320 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.65■□□□□ 0.58
EPHA3P29320 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA3P29320 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.65■□□□□ 0.58
EPHA3P29320 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA3P29320 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA3P29320 AL390719.1-204ENST00000412397 1219 ntBASIC18.65■□□□□ 0.58
EPHA3P29320 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA3P29320 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA3P29320 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
EPHA3P29320 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.65■□□□□ 0.58
EPHA3P29320 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
EPHA3P29320 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.65■□□□□ 0.58
EPHA3P29320 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.65■□□□□ 0.58
EPHA3P29320 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.65■□□□□ 0.58
EPHA3P29320 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
EPHA3P29320 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EPHA3P29320 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA3P29320 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EPHA3P29320 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA3P29320 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA3P29320 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA3P29320 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA3P29320 AC138932.1-201ENST00000534164 6830 ntBASIC18.65■□□□□ 0.58
EPHA3P29320 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
EPHA3P29320 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EPHA3P29320 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.64■□□□□ 0.58
EPHA3P29320 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.64■□□□□ 0.58
EPHA3P29320 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.64■□□□□ 0.58
EPHA3P29320 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EPHA3P29320 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.64■□□□□ 0.57
EPHA3P29320 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
EPHA3P29320 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.64■□□□□ 0.57
EPHA3P29320 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EPHA3P29320 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
EPHA3P29320 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EPHA3P29320 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EPHA3P29320 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.64■□□□□ 0.57
EPHA3P29320 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
EPHA3P29320 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms