Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTGFP29279 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
CTGFP29279 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTGFP29279 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CTGFP29279 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CTGFP29279 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTGFP29279 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.69■■□□□ 1.06
CTGFP29279 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CTGFP29279 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTGFP29279 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTGFP29279 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTGFP29279 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTGFP29279 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTGFP29279 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.69■■□□□ 1.06
CTGFP29279 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTGFP29279 MIR662-201ENST00000384847 95 ntBASIC21.69■■□□□ 1.06
CTGFP29279 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTGFP29279 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
CTGFP29279 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTGFP29279 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
CTGFP29279 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.69■■□□□ 1.06
CTGFP29279 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.69■■□□□ 1.06
CTGFP29279 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTGFP29279 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CTGFP29279 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTGFP29279 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTGFP29279 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTGFP29279 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTGFP29279 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTGFP29279 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.69■■□□□ 1.06
CTGFP29279 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CTGFP29279 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.69■■□□□ 1.06
CTGFP29279 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTGFP29279 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTGFP29279 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTGFP29279 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTGFP29279 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CTGFP29279 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CTGFP29279 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.68■■□□□ 1.06
CTGFP29279 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.68■■□□□ 1.06
CTGFP29279 AL121772.3-201ENST00000610840 674 ntBASIC21.68■■□□□ 1.06
CTGFP29279 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTGFP29279 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTGFP29279 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTGFP29279 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTGFP29279 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.68■■□□□ 1.06
CTGFP29279 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTGFP29279 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTGFP29279 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.68■■□□□ 1.06
CTGFP29279 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTGFP29279 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CTGFP29279 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTGFP29279 AL691432.2-201ENST00000607222 2038 ntBASIC21.67■■□□□ 1.06
CTGFP29279 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CTGFP29279 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CTGFP29279 TOB2P1-201ENST00000469761 992 ntBASIC21.67■■□□□ 1.06
CTGFP29279 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTGFP29279 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.67■■□□□ 1.06
CTGFP29279 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.67■■□□□ 1.06
CTGFP29279 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.67■■□□□ 1.06
CTGFP29279 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.67■■□□□ 1.06
CTGFP29279 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTGFP29279 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
CTGFP29279 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTGFP29279 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTGFP29279 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTGFP29279 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTGFP29279 AL391807.1-203ENST00000604392 2365 ntBASIC21.66■■□□□ 1.06
CTGFP29279 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTGFP29279 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTGFP29279 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTGFP29279 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTGFP29279 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.66■■□□□ 1.06
CTGFP29279 AL023284.2-201ENST00000405850 579 ntBASIC21.66■■□□□ 1.06
CTGFP29279 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.66■■□□□ 1.06
CTGFP29279 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTGFP29279 TSPY12P-201ENST00000421279 868 ntBASIC21.66■■□□□ 1.06
CTGFP29279 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.66■■□□□ 1.06
CTGFP29279 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.66■■□□□ 1.06
CTGFP29279 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.66■■□□□ 1.06
CTGFP29279 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.66■■□□□ 1.06
CTGFP29279 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.66■■□□□ 1.06
CTGFP29279 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTGFP29279 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTGFP29279 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.66■■□□□ 1.06
CTGFP29279 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTGFP29279 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTGFP29279 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTGFP29279 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.65■■□□□ 1.06
CTGFP29279 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTGFP29279 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.65■■□□□ 1.06
CTGFP29279 AC079834.2-201ENST00000609776 1949 ntBASIC21.65■■□□□ 1.06
CTGFP29279 HLA-A-201ENST00000376802 1334 ntBASIC21.65■■□□□ 1.06
CTGFP29279 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CTGFP29279 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.65■■□□□ 1.06
CTGFP29279 KRT16P4-201ENST00000453883 522 ntBASIC21.65■■□□□ 1.06
CTGFP29279 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTGFP29279 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.65■■□□□ 1.06
CTGFP29279 AL136038.4-201ENST00000603606 1261 ntBASIC21.65■■□□□ 1.06
CTGFP29279 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms