Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
ABCD3P28288 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.69■□□□□ 0.42
ABCD3P28288 RBM17P1-201ENST00000453646 1190 ntBASIC17.69■□□□□ 0.42
ABCD3P28288 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
ABCD3P28288 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.69■□□□□ 0.42
ABCD3P28288 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.69■□□□□ 0.42
ABCD3P28288 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.69■□□□□ 0.42
ABCD3P28288 DGCR10-201ENST00000609839 495 ntBASIC17.69■□□□□ 0.42
ABCD3P28288 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ABCD3P28288 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ABCD3P28288 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ABCD3P28288 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ABCD3P28288 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ABCD3P28288 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ABCD3P28288 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ABCD3P28288 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ABCD3P28288 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ABCD3P28288 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ABCD3P28288 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ABCD3P28288 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ABCD3P28288 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ABCD3P28288 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ABCD3P28288 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ABCD3P28288 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.68■□□□□ 0.42
ABCD3P28288 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ABCD3P28288 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.68■□□□□ 0.42
ABCD3P28288 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.68■□□□□ 0.42
ABCD3P28288 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ABCD3P28288 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ABCD3P28288 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ABCD3P28288 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ABCD3P28288 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ABCD3P28288 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
ABCD3P28288 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ABCD3P28288 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ABCD3P28288 FAM207BP-201ENST00000447172 505 ntBASIC17.68■□□□□ 0.42
ABCD3P28288 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ABCD3P28288 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ABCD3P28288 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.68■□□□□ 0.42
ABCD3P28288 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.68■□□□□ 0.42
ABCD3P28288 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.68■□□□□ 0.42
ABCD3P28288 AP000692.2-201ENST00000608391 879 ntBASIC17.68■□□□□ 0.42
ABCD3P28288 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.68■□□□□ 0.42
ABCD3P28288 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ABCD3P28288 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ABCD3P28288 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.68■□□□□ 0.42
ABCD3P28288 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.68■□□□□ 0.42
ABCD3P28288 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.68■□□□□ 0.42
ABCD3P28288 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.68■□□□□ 0.42
ABCD3P28288 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.68■□□□□ 0.42
ABCD3P28288 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ABCD3P28288 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ABCD3P28288 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ABCD3P28288 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ABCD3P28288 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.67■□□□□ 0.42
ABCD3P28288 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ABCD3P28288 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.67■□□□□ 0.42
ABCD3P28288 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ABCD3P28288 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ABCD3P28288 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ABCD3P28288 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ABCD3P28288 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ABCD3P28288 TSPY15P-201ENST00000457163 923 ntBASIC17.67■□□□□ 0.42
ABCD3P28288 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.67■□□□□ 0.42
ABCD3P28288 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.67■□□□□ 0.42
ABCD3P28288 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ABCD3P28288 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ABCD3P28288 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ABCD3P28288 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.67■□□□□ 0.42
ABCD3P28288 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.67■□□□□ 0.42
ABCD3P28288 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
ABCD3P28288 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.67■□□□□ 0.42
ABCD3P28288 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ABCD3P28288 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ABCD3P28288 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ABCD3P28288 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ABCD3P28288 AC005332.7-201ENST00000614046 2005 ntBASIC17.66■□□□□ 0.42
ABCD3P28288 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
ABCD3P28288 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.66■□□□□ 0.42
ABCD3P28288 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ABCD3P28288 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.66■□□□□ 0.42
ABCD3P28288 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ABCD3P28288 TSPY21P-201ENST00000433481 731 ntBASIC17.66■□□□□ 0.42
ABCD3P28288 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.66■□□□□ 0.42
ABCD3P28288 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ABCD3P28288 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.66■□□□□ 0.42
ABCD3P28288 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.66■□□□□ 0.42
ABCD3P28288 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.66■□□□□ 0.42
ABCD3P28288 TEX21P-204ENST00000641479 1693 ntBASIC17.66■□□□□ 0.42
ABCD3P28288 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ABCD3P28288 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ABCD3P28288 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.66■□□□□ 0.42
ABCD3P28288 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.66■□□□□ 0.42
ABCD3P28288 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ABCD3P28288 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ABCD3P28288 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.66■□□□□ 0.42
ABCD3P28288 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ABCD3P28288 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.65■□□□□ 0.42
ABCD3P28288 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ABCD3P28288 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms