Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 KRT16P6-202ENST00000425692 1426 ntBASIC18.81■□□□□ 0.6
LAMA1P25391 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LAMA1P25391 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LAMA1P25391 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.81■□□□□ 0.6
LAMA1P25391 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.81■□□□□ 0.6
LAMA1P25391 AC012615.1-201ENST00000565797 1299 ntBASIC18.81■□□□□ 0.6
LAMA1P25391 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LAMA1P25391 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LAMA1P25391 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LAMA1P25391 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LAMA1P25391 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LAMA1P25391 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.8■□□□□ 0.6
LAMA1P25391 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LAMA1P25391 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LAMA1P25391 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.8■□□□□ 0.6
LAMA1P25391 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.8■□□□□ 0.6
LAMA1P25391 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.8■□□□□ 0.6
LAMA1P25391 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.8■□□□□ 0.6
LAMA1P25391 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LAMA1P25391 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LAMA1P25391 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LAMA1P25391 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.8■□□□□ 0.6
LAMA1P25391 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
LAMA1P25391 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LAMA1P25391 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.8■□□□□ 0.6
LAMA1P25391 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LAMA1P25391 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LAMA1P25391 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LAMA1P25391 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LAMA1P25391 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LAMA1P25391 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LAMA1P25391 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LAMA1P25391 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LAMA1P25391 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.79■□□□□ 0.6
LAMA1P25391 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LAMA1P25391 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LAMA1P25391 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LAMA1P25391 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LAMA1P25391 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LAMA1P25391 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
LAMA1P25391 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
LAMA1P25391 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
LAMA1P25391 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.79■□□□□ 0.6
LAMA1P25391 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.79■□□□□ 0.6
LAMA1P25391 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LAMA1P25391 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LAMA1P25391 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LAMA1P25391 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LAMA1P25391 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LAMA1P25391 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
LAMA1P25391 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.79■□□□□ 0.6
LAMA1P25391 HLA-F-220ENST00000434407 884 ntBASIC18.79■□□□□ 0.6
LAMA1P25391 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LAMA1P25391 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LAMA1P25391 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.78■□□□□ 0.6
LAMA1P25391 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LAMA1P25391 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.78■□□□□ 0.6
LAMA1P25391 AL162741.1-201ENST00000565563 1558 ntBASIC18.78■□□□□ 0.6
LAMA1P25391 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
LAMA1P25391 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LAMA1P25391 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LAMA1P25391 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.78■□□□□ 0.6
LAMA1P25391 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.78■□□□□ 0.6
LAMA1P25391 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.78■□□□□ 0.6
LAMA1P25391 AL160286.2-201ENST00000567150 934 ntBASIC18.78■□□□□ 0.6
LAMA1P25391 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LAMA1P25391 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LAMA1P25391 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LAMA1P25391 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
LAMA1P25391 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.78■□□□□ 0.6
LAMA1P25391 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LAMA1P25391 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.78■□□□□ 0.6
LAMA1P25391 AC006538.3-201ENST00000612495 578 ntBASIC18.78■□□□□ 0.6
LAMA1P25391 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.78■□□□□ 0.6
LAMA1P25391 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LAMA1P25391 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LAMA1P25391 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LAMA1P25391 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.77■□□□□ 0.6
LAMA1P25391 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.77■□□□□ 0.6
LAMA1P25391 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LAMA1P25391 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.77■□□□□ 0.6
LAMA1P25391 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.77■□□□□ 0.6
LAMA1P25391 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LAMA1P25391 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LAMA1P25391 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LAMA1P25391 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
LAMA1P25391 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.77■□□□□ 0.6
LAMA1P25391 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.77■□□□□ 0.6
LAMA1P25391 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LAMA1P25391 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.77■□□□□ 0.6
LAMA1P25391 IFNL4P1-201ENST00000607083 540 ntBASIC18.77■□□□□ 0.6
LAMA1P25391 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
LAMA1P25391 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
LAMA1P25391 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LAMA1P25391 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LAMA1P25391 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
LAMA1P25391 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
LAMA1P25391 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LAMA1P25391 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.77■□□□□ 0.59
LAMA1P25391 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms