Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
KCNA3P22001 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
KCNA3P22001 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC23.57■■□□□ 1.36
KCNA3P22001 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC23.57■■□□□ 1.36
KCNA3P22001 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KCNA3P22001 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
KCNA3P22001 AC117500.6-201ENST00000624871 588 ntBASIC23.57■■□□□ 1.36
KCNA3P22001 AF228730.7-201ENST00000641842 219 ntBASIC23.57■■□□□ 1.36
KCNA3P22001 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
KCNA3P22001 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KCNA3P22001 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
KCNA3P22001 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
KCNA3P22001 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
KCNA3P22001 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
KCNA3P22001 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KCNA3P22001 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
KCNA3P22001 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
KCNA3P22001 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KCNA3P22001 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KCNA3P22001 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.56■■□□□ 1.36
KCNA3P22001 AL391807.1-203ENST00000604392 2365 ntBASIC23.56■■□□□ 1.36
KCNA3P22001 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KCNA3P22001 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KCNA3P22001 AL590627.1-203ENST00000421194 1026 ntBASIC23.56■■□□□ 1.36
KCNA3P22001 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC23.56■■□□□ 1.36
KCNA3P22001 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC23.56■■□□□ 1.36
KCNA3P22001 LINC01711-201ENST00000598340 967 ntBASIC23.56■■□□□ 1.36
KCNA3P22001 AL157888.1-201ENST00000631930 593 ntBASIC23.56■■□□□ 1.36
KCNA3P22001 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
KCNA3P22001 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KCNA3P22001 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC23.55■■□□□ 1.36
KCNA3P22001 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.55■■□□□ 1.36
KCNA3P22001 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KCNA3P22001 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC23.55■■□□□ 1.36
KCNA3P22001 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
KCNA3P22001 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
KCNA3P22001 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC23.55■■□□□ 1.36
KCNA3P22001 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
KCNA3P22001 RPP21-221ENST00000428040 594 ntTSL 2 BASIC23.55■■□□□ 1.36
KCNA3P22001 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KCNA3P22001 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
KCNA3P22001 RNA5SP419-201ENST00000515908 135 ntBASIC23.55■■□□□ 1.36
KCNA3P22001 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
KCNA3P22001 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC23.55■■□□□ 1.36
KCNA3P22001 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC23.55■■□□□ 1.36
KCNA3P22001 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC23.55■■□□□ 1.36
KCNA3P22001 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC23.55■■□□□ 1.36
KCNA3P22001 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KCNA3P22001 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
KCNA3P22001 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
KCNA3P22001 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.55■■□□□ 1.36
KCNA3P22001 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
KCNA3P22001 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KCNA3P22001 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.54■■□□□ 1.36
KCNA3P22001 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KCNA3P22001 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KCNA3P22001 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KCNA3P22001 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KCNA3P22001 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KCNA3P22001 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KCNA3P22001 DFFB-203ENST00000341385 572 ntTSL 5 BASIC23.54■■□□□ 1.36
KCNA3P22001 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
KCNA3P22001 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC23.54■■□□□ 1.36
KCNA3P22001 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
KCNA3P22001 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC23.54■■□□□ 1.36
KCNA3P22001 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
KCNA3P22001 AL353801.3-201ENST00000609898 542 ntBASIC23.54■■□□□ 1.36
KCNA3P22001 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
KCNA3P22001 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KCNA3P22001 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
KCNA3P22001 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KCNA3P22001 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KCNA3P22001 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
KCNA3P22001 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KCNA3P22001 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KCNA3P22001 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.53■■□□□ 1.36
KCNA3P22001 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
KCNA3P22001 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
KCNA3P22001 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.53■■□□□ 1.36
KCNA3P22001 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.53■■□□□ 1.36
KCNA3P22001 AKR1C7P-201ENST00000305623 895 ntBASIC23.53■■□□□ 1.36
KCNA3P22001 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.53■■□□□ 1.36
KCNA3P22001 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KCNA3P22001 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
KCNA3P22001 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
KCNA3P22001 PENK-208ENST00000523051 772 ntTSL 5 BASIC23.53■■□□□ 1.36
KCNA3P22001 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC23.53■■□□□ 1.36
KCNA3P22001 AL136038.4-201ENST00000603606 1261 ntBASIC23.53■■□□□ 1.36
KCNA3P22001 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KCNA3P22001 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KCNA3P22001 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
KCNA3P22001 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
KCNA3P22001 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KCNA3P22001 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
KCNA3P22001 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KCNA3P22001 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
KCNA3P22001 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KCNA3P22001 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KCNA3P22001 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KCNA3P22001 KRT18P13-201ENST00000400056 1290 ntBASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms