Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CAPN3P20807 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CAPN3P20807 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.47■□□□□ 0.55
CAPN3P20807 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN3P20807 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CAPN3P20807 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.46■□□□□ 0.55
CAPN3P20807 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN3P20807 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN3P20807 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN3P20807 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.46■□□□□ 0.55
CAPN3P20807 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.46■□□□□ 0.55
CAPN3P20807 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.46■□□□□ 0.55
CAPN3P20807 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.46■□□□□ 0.55
CAPN3P20807 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.46■□□□□ 0.55
CAPN3P20807 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN3P20807 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.46■□□□□ 0.55
CAPN3P20807 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN3P20807 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN3P20807 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN3P20807 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CAPN3P20807 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CAPN3P20807 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN3P20807 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN3P20807 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN3P20807 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPN3P20807 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CAPN3P20807 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.46■□□□□ 0.54
CAPN3P20807 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN3P20807 AC104417.2-201ENST00000562989 1793 ntBASIC18.45■□□□□ 0.54
CAPN3P20807 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CAPN3P20807 AC135050.7-201ENST00000624508 2218 ntBASIC18.45■□□□□ 0.54
CAPN3P20807 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN3P20807 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN3P20807 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN3P20807 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN3P20807 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.45■□□□□ 0.54
CAPN3P20807 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN3P20807 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.45■□□□□ 0.54
CAPN3P20807 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
CAPN3P20807 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.45■□□□□ 0.54
CAPN3P20807 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.45■□□□□ 0.54
CAPN3P20807 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN3P20807 AC006058.3-201ENST00000606217 1069 ntBASIC18.45■□□□□ 0.54
CAPN3P20807 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.45■□□□□ 0.54
CAPN3P20807 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN3P20807 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.45■□□□□ 0.54
CAPN3P20807 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.45■□□□□ 0.54
CAPN3P20807 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN3P20807 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN3P20807 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPN3P20807 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.44■□□□□ 0.54
CAPN3P20807 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN3P20807 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.44■□□□□ 0.54
CAPN3P20807 AC090164.3-201ENST00000610780 2143 ntBASIC18.44■□□□□ 0.54
CAPN3P20807 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CAPN3P20807 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN3P20807 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN3P20807 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN3P20807 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.44■□□□□ 0.54
CAPN3P20807 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN3P20807 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CAPN3P20807 LSM12P1-201ENST00000411836 588 ntBASIC18.44■□□□□ 0.54
CAPN3P20807 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN3P20807 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN3P20807 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.44■□□□□ 0.54
CAPN3P20807 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.44■□□□□ 0.54
CAPN3P20807 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN3P20807 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN3P20807 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.44■□□□□ 0.54
CAPN3P20807 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN3P20807 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.44■□□□□ 0.54
CAPN3P20807 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN3P20807 AL390961.4-201ENST00000623958 2535 ntBASIC18.44■□□□□ 0.54
CAPN3P20807 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPN3P20807 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN3P20807 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN3P20807 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.43■□□□□ 0.54
CAPN3P20807 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN3P20807 Z98044.1-201ENST00000632503 1764 ntBASIC18.43■□□□□ 0.54
CAPN3P20807 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN3P20807 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CAPN3P20807 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.43■□□□□ 0.54
CAPN3P20807 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.43■□□□□ 0.54
CAPN3P20807 AC128676.1-201ENST00000454392 318 ntBASIC18.43■□□□□ 0.54
CAPN3P20807 UNC93B4-201ENST00000505679 747 ntBASIC18.43■□□□□ 0.54
CAPN3P20807 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.43■□□□□ 0.54
CAPN3P20807 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.43■□□□□ 0.54
CAPN3P20807 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN3P20807 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN3P20807 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.43■□□□□ 0.54
CAPN3P20807 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CAPN3P20807 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN3P20807 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN3P20807 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN3P20807 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPN3P20807 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.42■□□□□ 0.54
CAPN3P20807 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CAPN3P20807 AL512353.2-201ENST00000448759 1962 ntBASIC18.42■□□□□ 0.54
CAPN3P20807 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CAPN3P20807 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms