Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BCL3P20749 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.32■□□□□ 0.2
BCL3P20749 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.32■□□□□ 0.2
BCL3P20749 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BCL3P20749 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BCL3P20749 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.32■□□□□ 0.2
BCL3P20749 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.32■□□□□ 0.2
BCL3P20749 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BCL3P20749 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.32■□□□□ 0.2
BCL3P20749 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.32■□□□□ 0.2
BCL3P20749 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BCL3P20749 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.32■□□□□ 0.2
BCL3P20749 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BCL3P20749 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BCL3P20749 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
BCL3P20749 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BCL3P20749 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.31■□□□□ 0.2
BCL3P20749 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BCL3P20749 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BCL3P20749 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.31■□□□□ 0.2
BCL3P20749 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
BCL3P20749 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
BCL3P20749 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BCL3P20749 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
BCL3P20749 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BCL3P20749 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BCL3P20749 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BCL3P20749 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
BCL3P20749 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
BCL3P20749 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.31■□□□□ 0.2
BCL3P20749 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
BCL3P20749 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BCL3P20749 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.31■□□□□ 0.2
BCL3P20749 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.31■□□□□ 0.2
BCL3P20749 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.31■□□□□ 0.2
BCL3P20749 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BCL3P20749 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.31■□□□□ 0.2
BCL3P20749 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.31■□□□□ 0.2
BCL3P20749 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.31■□□□□ 0.2
BCL3P20749 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
BCL3P20749 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
BCL3P20749 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
BCL3P20749 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BCL3P20749 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.31■□□□□ 0.2
BCL3P20749 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
BCL3P20749 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BCL3P20749 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
BCL3P20749 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
BCL3P20749 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BCL3P20749 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.3■□□□□ 0.2
BCL3P20749 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.3■□□□□ 0.2
BCL3P20749 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BCL3P20749 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
BCL3P20749 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BCL3P20749 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.3■□□□□ 0.2
BCL3P20749 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BCL3P20749 AC006333.2-201ENST00000607957 2099 ntBASIC16.3■□□□□ 0.2
BCL3P20749 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BCL3P20749 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.3■□□□□ 0.2
BCL3P20749 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BCL3P20749 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BCL3P20749 KRT17P3-201ENST00000420566 1262 ntBASIC16.3■□□□□ 0.2
BCL3P20749 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BCL3P20749 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BCL3P20749 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
BCL3P20749 AC069544.1-201ENST00000609399 999 ntBASIC16.3■□□□□ 0.2
BCL3P20749 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BCL3P20749 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BCL3P20749 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BCL3P20749 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.3■□□□□ 0.2
BCL3P20749 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BCL3P20749 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BCL3P20749 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BCL3P20749 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BCL3P20749 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.29■□□□□ 0.2
BCL3P20749 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
BCL3P20749 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BCL3P20749 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BCL3P20749 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BCL3P20749 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.29■□□□□ 0.2
BCL3P20749 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BCL3P20749 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BCL3P20749 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BCL3P20749 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
BCL3P20749 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.29■□□□□ 0.2
BCL3P20749 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BCL3P20749 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BCL3P20749 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BCL3P20749 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BCL3P20749 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
BCL3P20749 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BCL3P20749 AC026366.1-201ENST00000488803 879 ntBASIC16.29■□□□□ 0.2
BCL3P20749 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.29■□□□□ 0.2
BCL3P20749 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BCL3P20749 AC233263.1-201ENST00000578059 224 ntBASIC16.29■□□□□ 0.2
BCL3P20749 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BCL3P20749 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
BCL3P20749 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BCL3P20749 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
BCL3P20749 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms