Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.74■□□□□ 0.43
PRKCAP17252 AL032819.2-201ENST00000624543 2162 ntBASIC17.74■□□□□ 0.43
PRKCAP17252 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRKCAP17252 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRKCAP17252 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PRKCAP17252 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PRKCAP17252 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRKCAP17252 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PRKCAP17252 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRKCAP17252 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRKCAP17252 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PRKCAP17252 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PRKCAP17252 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.74■□□□□ 0.43
PRKCAP17252 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.74■□□□□ 0.43
PRKCAP17252 AC133681.1-201ENST00000465482 601 ntBASIC17.74■□□□□ 0.43
PRKCAP17252 C1QBPP2-201ENST00000528754 825 ntBASIC17.74■□□□□ 0.43
PRKCAP17252 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
PRKCAP17252 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.74■□□□□ 0.43
PRKCAP17252 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRKCAP17252 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.74■□□□□ 0.43
PRKCAP17252 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRKCAP17252 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.74■□□□□ 0.43
PRKCAP17252 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRKCAP17252 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRKCAP17252 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.74■□□□□ 0.43
PRKCAP17252 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
PRKCAP17252 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRKCAP17252 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRKCAP17252 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRKCAP17252 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRKCAP17252 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRKCAP17252 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRKCAP17252 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.73■□□□□ 0.43
PRKCAP17252 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRKCAP17252 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PRKCAP17252 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRKCAP17252 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRKCAP17252 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRKCAP17252 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRKCAP17252 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.73■□□□□ 0.43
PRKCAP17252 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PRKCAP17252 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.73■□□□□ 0.43
PRKCAP17252 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.73■□□□□ 0.43
PRKCAP17252 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRKCAP17252 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.73■□□□□ 0.43
PRKCAP17252 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRKCAP17252 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PRKCAP17252 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.73■□□□□ 0.43
PRKCAP17252 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRKCAP17252 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.73■□□□□ 0.43
PRKCAP17252 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRKCAP17252 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRKCAP17252 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.72■□□□□ 0.43
PRKCAP17252 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRKCAP17252 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
PRKCAP17252 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRKCAP17252 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRKCAP17252 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PRKCAP17252 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRKCAP17252 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRKCAP17252 PRORSD1P-201ENST00000295112 541 ntBASIC17.72■□□□□ 0.43
PRKCAP17252 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.72■□□□□ 0.43
PRKCAP17252 TUBB8P6-201ENST00000436895 1288 ntBASIC17.72■□□□□ 0.43
PRKCAP17252 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRKCAP17252 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PRKCAP17252 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.72■□□□□ 0.43
PRKCAP17252 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.72■□□□□ 0.43
PRKCAP17252 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PRKCAP17252 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.72■□□□□ 0.43
PRKCAP17252 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PRKCAP17252 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PRKCAP17252 AC004264.1-201ENST00000608354 794 ntBASIC17.72■□□□□ 0.43
PRKCAP17252 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.72■□□□□ 0.43
PRKCAP17252 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.72■□□□□ 0.43
PRKCAP17252 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRKCAP17252 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.72■□□□□ 0.43
PRKCAP17252 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.72■□□□□ 0.43
PRKCAP17252 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRKCAP17252 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRKCAP17252 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.72■□□□□ 0.43
PRKCAP17252 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRKCAP17252 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRKCAP17252 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRKCAP17252 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.71■□□□□ 0.43
PRKCAP17252 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRKCAP17252 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRKCAP17252 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.71■□□□□ 0.43
PRKCAP17252 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PRKCAP17252 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRKCAP17252 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PRKCAP17252 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.71■□□□□ 0.43
PRKCAP17252 RPPH1-201ENST00000516869 333 ntBASIC17.71■□□□□ 0.43
PRKCAP17252 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.71■□□□□ 0.43
PRKCAP17252 AC110285.5-201ENST00000611501 352 ntBASIC17.71■□□□□ 0.43
PRKCAP17252 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.71■□□□□ 0.43
PRKCAP17252 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRKCAP17252 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PRKCAP17252 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRKCAP17252 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PRKCAP17252 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms