Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.55■■□□□ 1.36
COL11A2P13942 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL11A2P13942 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC23.55■■□□□ 1.36
COL11A2P13942 MPI-205ENST00000562606 1052 ntTSL 3 BASIC23.55■■□□□ 1.36
COL11A2P13942 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC23.55■■□□□ 1.36
COL11A2P13942 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC23.55■■□□□ 1.36
COL11A2P13942 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.55■■□□□ 1.36
COL11A2P13942 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL11A2P13942 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.55■■□□□ 1.36
COL11A2P13942 AC020907.5-201ENST00000624372 1936 ntBASIC23.55■■□□□ 1.36
COL11A2P13942 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
COL11A2P13942 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
COL11A2P13942 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC23.54■■□□□ 1.36
COL11A2P13942 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
COL11A2P13942 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.54■■□□□ 1.36
COL11A2P13942 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.54■■□□□ 1.36
COL11A2P13942 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL11A2P13942 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
COL11A2P13942 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC23.54■■□□□ 1.36
COL11A2P13942 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
COL11A2P13942 RNF126P1-202ENST00000569893 925 ntBASIC23.54■■□□□ 1.36
COL11A2P13942 AC011498.5-201ENST00000592027 486 ntBASIC23.54■■□□□ 1.36
COL11A2P13942 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.54■■□□□ 1.36
COL11A2P13942 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL11A2P13942 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
COL11A2P13942 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL11A2P13942 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.54■■□□□ 1.36
COL11A2P13942 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
COL11A2P13942 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL11A2P13942 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC23.53■■□□□ 1.36
COL11A2P13942 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
COL11A2P13942 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL11A2P13942 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL11A2P13942 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL11A2P13942 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
COL11A2P13942 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL11A2P13942 TSPY19P-201ENST00000418461 509 ntBASIC23.53■■□□□ 1.36
COL11A2P13942 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
COL11A2P13942 TSPY18P-201ENST00000441642 509 ntBASIC23.53■■□□□ 1.36
COL11A2P13942 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC23.53■■□□□ 1.36
COL11A2P13942 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.53■■□□□ 1.36
COL11A2P13942 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
COL11A2P13942 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
COL11A2P13942 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL11A2P13942 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL11A2P13942 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.52■■□□□ 1.36
COL11A2P13942 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL11A2P13942 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.52■■□□□ 1.36
COL11A2P13942 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.52■■□□□ 1.36
COL11A2P13942 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC23.52■■□□□ 1.36
COL11A2P13942 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COL11A2P13942 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COL11A2P13942 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL11A2P13942 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.52■■□□□ 1.36
COL11A2P13942 AL512408.1-201ENST00000569378 2000 ntBASIC23.52■■□□□ 1.36
COL11A2P13942 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.52■■□□□ 1.36
COL11A2P13942 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
COL11A2P13942 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL11A2P13942 DRAXINP1-201ENST00000437611 948 ntBASIC23.52■■□□□ 1.36
COL11A2P13942 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COL11A2P13942 AL136038.4-201ENST00000603606 1261 ntBASIC23.52■■□□□ 1.36
COL11A2P13942 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL11A2P13942 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL11A2P13942 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL11A2P13942 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.52■■□□□ 1.36
COL11A2P13942 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL11A2P13942 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.51■■□□□ 1.35
COL11A2P13942 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC23.51■■□□□ 1.35
COL11A2P13942 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL11A2P13942 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL11A2P13942 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL11A2P13942 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL11A2P13942 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.51■■□□□ 1.35
COL11A2P13942 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL11A2P13942 MIR3180-5-201ENST00000583743 153 ntBASIC23.51■■□□□ 1.35
COL11A2P13942 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC23.51■■□□□ 1.35
COL11A2P13942 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL11A2P13942 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL11A2P13942 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL11A2P13942 ZNF815P-204ENST00000434898 1737 ntBASIC23.51■■□□□ 1.35
COL11A2P13942 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
COL11A2P13942 TOB2P1-201ENST00000469761 992 ntBASIC23.5■■□□□ 1.35
COL11A2P13942 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
COL11A2P13942 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL11A2P13942 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC23.5■■□□□ 1.35
COL11A2P13942 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC23.5■■□□□ 1.35
COL11A2P13942 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
COL11A2P13942 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL11A2P13942 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL11A2P13942 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
COL11A2P13942 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL11A2P13942 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
COL11A2P13942 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL11A2P13942 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL11A2P13942 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL11A2P13942 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL11A2P13942 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL11A2P13942 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
COL11A2P13942 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
COL11A2P13942 PNN-202ENST00000553331 656 ntTSL 3 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms