Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLTAP09496 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.98■□□□□ 0.95
CLTAP09496 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLTAP09496 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLTAP09496 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.98■□□□□ 0.95
CLTAP09496 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.98■□□□□ 0.95
CLTAP09496 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
CLTAP09496 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.98■□□□□ 0.95
CLTAP09496 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.98■□□□□ 0.95
CLTAP09496 DGCR10-201ENST00000609839 495 ntBASIC20.98■□□□□ 0.95
CLTAP09496 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLTAP09496 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLTAP09496 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.98■□□□□ 0.95
CLTAP09496 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLTAP09496 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.98■□□□□ 0.95
CLTAP09496 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLTAP09496 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLTAP09496 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLTAP09496 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CLTAP09496 AC104417.2-201ENST00000562989 1793 ntBASIC20.97■□□□□ 0.95
CLTAP09496 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLTAP09496 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLTAP09496 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLTAP09496 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.97■□□□□ 0.95
CLTAP09496 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLTAP09496 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLTAP09496 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLTAP09496 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLTAP09496 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.97■□□□□ 0.95
CLTAP09496 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CLTAP09496 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.97■□□□□ 0.95
CLTAP09496 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.97■□□□□ 0.95
CLTAP09496 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLTAP09496 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLTAP09496 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CLTAP09496 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CLTAP09496 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLTAP09496 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLTAP09496 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CLTAP09496 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.97■□□□□ 0.95
CLTAP09496 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.97■□□□□ 0.95
CLTAP09496 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CLTAP09496 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLTAP09496 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.97■□□□□ 0.95
CLTAP09496 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLTAP09496 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLTAP09496 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLTAP09496 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLTAP09496 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CLTAP09496 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLTAP09496 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.96■□□□□ 0.95
CLTAP09496 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLTAP09496 AC008040.2-201ENST00000461049 708 ntBASIC20.96■□□□□ 0.95
CLTAP09496 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLTAP09496 AC091390.4-202ENST00000476426 537 ntBASIC20.96■□□□□ 0.95
CLTAP09496 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.96■□□□□ 0.95
CLTAP09496 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.96■□□□□ 0.95
CLTAP09496 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.96■□□□□ 0.95
CLTAP09496 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLTAP09496 AP000525.1-201ENST00000608286 694 ntBASIC20.96■□□□□ 0.95
CLTAP09496 AP000692.2-201ENST00000608391 879 ntBASIC20.96■□□□□ 0.95
CLTAP09496 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CLTAP09496 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.96■□□□□ 0.95
CLTAP09496 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CLTAP09496 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLTAP09496 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLTAP09496 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLTAP09496 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLTAP09496 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLTAP09496 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CLTAP09496 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CLTAP09496 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
CLTAP09496 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLTAP09496 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.95■□□□□ 0.94
CLTAP09496 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.95■□□□□ 0.94
CLTAP09496 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLTAP09496 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CLTAP09496 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLTAP09496 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLTAP09496 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLTAP09496 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CLTAP09496 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLTAP09496 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLTAP09496 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.95■□□□□ 0.94
CLTAP09496 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CLTAP09496 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLTAP09496 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.95■□□□□ 0.94
CLTAP09496 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.95■□□□□ 0.94
CLTAP09496 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CLTAP09496 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLTAP09496 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.95■□□□□ 0.94
CLTAP09496 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.95■□□□□ 0.94
CLTAP09496 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.95■□□□□ 0.94
CLTAP09496 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.95■□□□□ 0.94
CLTAP09496 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.95■□□□□ 0.94
CLTAP09496 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CLTAP09496 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLTAP09496 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLTAP09496 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLTAP09496 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms