Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.9■□□□□ 0.78
CD48P09326 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CD48P09326 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CD48P09326 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CD48P09326 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.9■□□□□ 0.78
CD48P09326 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CD48P09326 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CD48P09326 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CD48P09326 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CD48P09326 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD48P09326 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD48P09326 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CD48P09326 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD48P09326 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.89■□□□□ 0.77
CD48P09326 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD48P09326 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD48P09326 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.89■□□□□ 0.77
CD48P09326 CROCCP3-202ENST00000420820 1947 ntBASIC19.89■□□□□ 0.77
CD48P09326 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CD48P09326 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CD48P09326 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CD48P09326 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.89■□□□□ 0.77
CD48P09326 RPPH1-201ENST00000516869 333 ntBASIC19.89■□□□□ 0.77
CD48P09326 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.89■□□□□ 0.77
CD48P09326 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CD48P09326 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.89■□□□□ 0.77
CD48P09326 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.89■□□□□ 0.77
CD48P09326 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.89■□□□□ 0.77
CD48P09326 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD48P09326 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CD48P09326 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CD48P09326 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD48P09326 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD48P09326 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD48P09326 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CD48P09326 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CD48P09326 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD48P09326 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD48P09326 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD48P09326 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.88■□□□□ 0.77
CD48P09326 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.88■□□□□ 0.77
CD48P09326 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.88■□□□□ 0.77
CD48P09326 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD48P09326 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD48P09326 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.88■□□□□ 0.77
CD48P09326 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD48P09326 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD48P09326 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.88■□□□□ 0.77
CD48P09326 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.88■□□□□ 0.77
CD48P09326 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CD48P09326 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD48P09326 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD48P09326 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD48P09326 KRT8P41-201ENST00000533985 1514 ntBASIC19.87■□□□□ 0.77
CD48P09326 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD48P09326 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD48P09326 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CD48P09326 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD48P09326 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD48P09326 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD48P09326 FAM201B-201ENST00000458407 597 ntBASIC19.87■□□□□ 0.77
CD48P09326 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.87■□□□□ 0.77
CD48P09326 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.87■□□□□ 0.77
CD48P09326 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD48P09326 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD48P09326 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.87■□□□□ 0.77
CD48P09326 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CD48P09326 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.87■□□□□ 0.77
CD48P09326 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD48P09326 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.87■□□□□ 0.77
CD48P09326 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD48P09326 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD48P09326 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CD48P09326 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.86■□□□□ 0.77
CD48P09326 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD48P09326 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.86■□□□□ 0.77
CD48P09326 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD48P09326 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CD48P09326 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD48P09326 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CD48P09326 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.86■□□□□ 0.77
CD48P09326 Z85996.1-201ENST00000494644 937 ntBASIC19.86■□□□□ 0.77
CD48P09326 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.86■□□□□ 0.77
CD48P09326 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CD48P09326 ITM2C-210ENST00000620962 501 ntBASIC19.86■□□□□ 0.77
CD48P09326 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD48P09326 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.86■□□□□ 0.77
CD48P09326 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD48P09326 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD48P09326 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CD48P09326 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.86■□□□□ 0.77
CD48P09326 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.86■□□□□ 0.77
CD48P09326 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.85■□□□□ 0.77
CD48P09326 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.85■□□□□ 0.77
CD48P09326 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD48P09326 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CD48P09326 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CD48P09326 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD48P09326 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CD48P09326 HTR7P1-201ENST00000538670 1336 ntBASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms