Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.93■■□□□ 1.1
ALDH1A1P00352 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.93■■□□□ 1.1
ALDH1A1P00352 AL391807.1-203ENST00000604392 2365 ntBASIC21.92■■□□□ 1.1
ALDH1A1P00352 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A1P00352 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.92■■□□□ 1.1
ALDH1A1P00352 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A1P00352 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.92■■□□□ 1.1
ALDH1A1P00352 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A1P00352 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A1P00352 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A1P00352 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A1P00352 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A1P00352 KRT16P4-201ENST00000453883 522 ntBASIC21.92■■□□□ 1.1
ALDH1A1P00352 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.92■■□□□ 1.1
ALDH1A1P00352 SEC1P-202ENST00000473944 940 ntBASIC21.92■■□□□ 1.1
ALDH1A1P00352 AC090616.6-201ENST00000582640 721 ntBASIC21.92■■□□□ 1.1
ALDH1A1P00352 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.92■■□□□ 1.1
ALDH1A1P00352 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
ALDH1A1P00352 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.92■■□□□ 1.1
ALDH1A1P00352 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
ALDH1A1P00352 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
ALDH1A1P00352 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A1P00352 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A1P00352 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A1P00352 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A1P00352 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ALDH1A1P00352 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.91■■□□□ 1.1
ALDH1A1P00352 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
ALDH1A1P00352 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
ALDH1A1P00352 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ALDH1A1P00352 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ALDH1A1P00352 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.91■■□□□ 1.1
ALDH1A1P00352 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
ALDH1A1P00352 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
ALDH1A1P00352 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ALDH1A1P00352 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.91■■□□□ 1.1
ALDH1A1P00352 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.91■■□□□ 1.1
ALDH1A1P00352 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.91■■□□□ 1.1
ALDH1A1P00352 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
ALDH1A1P00352 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ALDH1A1P00352 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
ALDH1A1P00352 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.9■■□□□ 1.1
ALDH1A1P00352 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ALDH1A1P00352 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
ALDH1A1P00352 MIR574-201ENST00000385209 96 ntBASIC21.9■■□□□ 1.1
ALDH1A1P00352 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.9■■□□□ 1.1
ALDH1A1P00352 GPAT2P1-201ENST00000444924 1672 ntBASIC21.9■■□□□ 1.1
ALDH1A1P00352 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ALDH1A1P00352 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
ALDH1A1P00352 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
ALDH1A1P00352 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ALDH1A1P00352 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
ALDH1A1P00352 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.89■■□□□ 1.09
ALDH1A1P00352 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.89■■□□□ 1.09
ALDH1A1P00352 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ALDH1A1P00352 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ALDH1A1P00352 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
ALDH1A1P00352 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.89■■□□□ 1.09
ALDH1A1P00352 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.89■■□□□ 1.09
ALDH1A1P00352 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.89■■□□□ 1.09
ALDH1A1P00352 MIR3917-201ENST00000580971 93 ntBASIC21.89■■□□□ 1.09
ALDH1A1P00352 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.89■■□□□ 1.09
ALDH1A1P00352 AL157888.1-201ENST00000631930 593 ntBASIC21.89■■□□□ 1.09
ALDH1A1P00352 AF228730.7-201ENST00000641842 219 ntBASIC21.89■■□□□ 1.09
ALDH1A1P00352 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ALDH1A1P00352 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ALDH1A1P00352 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ALDH1A1P00352 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ALDH1A1P00352 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ALDH1A1P00352 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ALDH1A1P00352 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
ALDH1A1P00352 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ALDH1A1P00352 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.88■■□□□ 1.09
ALDH1A1P00352 AC036111.1-201ENST00000533973 1582 ntBASIC21.88■■□□□ 1.09
ALDH1A1P00352 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.88■■□□□ 1.09
ALDH1A1P00352 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
ALDH1A1P00352 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ALDH1A1P00352 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ALDH1A1P00352 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.88■■□□□ 1.09
ALDH1A1P00352 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.88■■□□□ 1.09
ALDH1A1P00352 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ALDH1A1P00352 AC074051.2-201ENST00000565115 352 ntBASIC21.88■■□□□ 1.09
ALDH1A1P00352 RNF126P1-202ENST00000569893 925 ntBASIC21.88■■□□□ 1.09
ALDH1A1P00352 MIR3180-5-201ENST00000583743 153 ntBASIC21.88■■□□□ 1.09
ALDH1A1P00352 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.88■■□□□ 1.09
ALDH1A1P00352 AC138894.3-201ENST00000603787 634 ntBASIC21.88■■□□□ 1.09
ALDH1A1P00352 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ALDH1A1P00352 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ALDH1A1P00352 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ALDH1A1P00352 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
ALDH1A1P00352 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
ALDH1A1P00352 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
ALDH1A1P00352 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ALDH1A1P00352 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ALDH1A1P00352 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
ALDH1A1P00352 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.87■■□□□ 1.09
ALDH1A1P00352 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ALDH1A1P00352 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
ALDH1A1P00352 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ALDH1A1P00352 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms