Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.83■□□□□ 0.61
CPNE6O95741 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE6O95741 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE6O95741 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE6O95741 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.83■□□□□ 0.6
CPNE6O95741 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CPNE6O95741 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CPNE6O95741 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
CPNE6O95741 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE6O95741 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CPNE6O95741 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.83■□□□□ 0.6
CPNE6O95741 AL049597.2-201ENST00000565575 961 ntBASIC18.83■□□□□ 0.6
CPNE6O95741 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CPNE6O95741 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.83■□□□□ 0.6
CPNE6O95741 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CPNE6O95741 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.83■□□□□ 0.6
CPNE6O95741 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.83■□□□□ 0.6
CPNE6O95741 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CPNE6O95741 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.83■□□□□ 0.6
CPNE6O95741 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.82■□□□□ 0.6
CPNE6O95741 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE6O95741 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE6O95741 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE6O95741 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.82■□□□□ 0.6
CPNE6O95741 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE6O95741 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE6O95741 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE6O95741 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE6O95741 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CPNE6O95741 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CPNE6O95741 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE6O95741 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE6O95741 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE6O95741 SLC25A3P1-201ENST00000443844 931 ntBASIC18.82■□□□□ 0.6
CPNE6O95741 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.82■□□□□ 0.6
CPNE6O95741 AC097488.1-201ENST00000507834 756 ntBASIC18.82■□□□□ 0.6
CPNE6O95741 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE6O95741 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.82■□□□□ 0.6
CPNE6O95741 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CPNE6O95741 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE6O95741 AL445228.2-201ENST00000605589 952 ntBASIC18.82■□□□□ 0.6
CPNE6O95741 AL590326.2-201ENST00000625139 305 ntBASIC18.82■□□□□ 0.6
CPNE6O95741 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.82■□□□□ 0.6
CPNE6O95741 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.82■□□□□ 0.6
CPNE6O95741 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CPNE6O95741 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CPNE6O95741 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.82■□□□□ 0.6
CPNE6O95741 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.81■□□□□ 0.6
CPNE6O95741 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CPNE6O95741 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.81■□□□□ 0.6
CPNE6O95741 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.81■□□□□ 0.6
CPNE6O95741 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CPNE6O95741 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CPNE6O95741 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 TERF1P1-201ENST00000311003 1181 ntBASIC18.81■□□□□ 0.6
CPNE6O95741 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CPNE6O95741 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.81■□□□□ 0.6
CPNE6O95741 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CPNE6O95741 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CPNE6O95741 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CPNE6O95741 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CPNE6O95741 BX119927.1-201ENST00000636596 1552 ntBASIC18.81■□□□□ 0.6
CPNE6O95741 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE6O95741 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE6O95741 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE6O95741 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE6O95741 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE6O95741 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CPNE6O95741 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE6O95741 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.8■□□□□ 0.6
CPNE6O95741 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE6O95741 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPNE6O95741 CRYGFP-201ENST00000418459 633 ntBASIC18.8■□□□□ 0.6
CPNE6O95741 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CPNE6O95741 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.8■□□□□ 0.6
CPNE6O95741 KRT18P57-201ENST00000443599 1254 ntBASIC18.8■□□□□ 0.6
CPNE6O95741 EGLN1P1-201ENST00000531623 762 ntBASIC18.8■□□□□ 0.6
CPNE6O95741 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.8■□□□□ 0.6
CPNE6O95741 AC130371.2-201ENST00000619443 611 ntBASIC18.8■□□□□ 0.6
CPNE6O95741 HLA-A-209ENST00000638375 975 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms