Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALX3O95076 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALX3O95076 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALX3O95076 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALX3O95076 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALX3O95076 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX3O95076 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX3O95076 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.94■□□□□ 0.3
ALX3O95076 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ALX3O95076 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX3O95076 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
ALX3O95076 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX3O95076 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ALX3O95076 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.94■□□□□ 0.3
ALX3O95076 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX3O95076 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ALX3O95076 AL391005.1-201ENST00000623953 2435 ntBASIC16.94■□□□□ 0.3
ALX3O95076 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ALX3O95076 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX3O95076 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.94■□□□□ 0.3
ALX3O95076 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.94■□□□□ 0.3
ALX3O95076 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.94■□□□□ 0.3
ALX3O95076 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.94■□□□□ 0.3
ALX3O95076 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX3O95076 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX3O95076 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
ALX3O95076 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ALX3O95076 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.94■□□□□ 0.3
ALX3O95076 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX3O95076 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.94■□□□□ 0.3
ALX3O95076 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.94■□□□□ 0.3
ALX3O95076 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX3O95076 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALX3O95076 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
ALX3O95076 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ALX3O95076 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ALX3O95076 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
ALX3O95076 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.93■□□□□ 0.3
ALX3O95076 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.93■□□□□ 0.3
ALX3O95076 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.93■□□□□ 0.3
ALX3O95076 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALX3O95076 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.93■□□□□ 0.3
ALX3O95076 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALX3O95076 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ALX3O95076 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.93■□□□□ 0.3
ALX3O95076 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALX3O95076 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.93■□□□□ 0.3
ALX3O95076 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ALX3O95076 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.93■□□□□ 0.3
ALX3O95076 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.93■□□□□ 0.3
ALX3O95076 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALX3O95076 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALX3O95076 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.93■□□□□ 0.3
ALX3O95076 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALX3O95076 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.93■□□□□ 0.3
ALX3O95076 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ALX3O95076 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.93■□□□□ 0.3
ALX3O95076 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX3O95076 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALX3O95076 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.92■□□□□ 0.3
ALX3O95076 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
ALX3O95076 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALX3O95076 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX3O95076 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX3O95076 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ALX3O95076 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ALX3O95076 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
ALX3O95076 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.92■□□□□ 0.3
ALX3O95076 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALX3O95076 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.92■□□□□ 0.3
ALX3O95076 AC133552.2-202ENST00000575694 574 ntBASIC16.92■□□□□ 0.3
ALX3O95076 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.92■□□□□ 0.3
ALX3O95076 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.92■□□□□ 0.3
ALX3O95076 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.92■□□□□ 0.3
ALX3O95076 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX3O95076 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX3O95076 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
ALX3O95076 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.92■□□□□ 0.3
ALX3O95076 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALX3O95076 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.92■□□□□ 0.3
ALX3O95076 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALX3O95076 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.92■□□□□ 0.3
ALX3O95076 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX3O95076 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALX3O95076 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ALX3O95076 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALX3O95076 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.91■□□□□ 0.3
ALX3O95076 AC046158.3-201ENST00000624947 2558 ntBASIC16.91■□□□□ 0.3
ALX3O95076 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.91■□□□□ 0.3
ALX3O95076 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALX3O95076 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.91■□□□□ 0.3
ALX3O95076 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALX3O95076 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ALX3O95076 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALX3O95076 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALX3O95076 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
ALX3O95076 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALX3O95076 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ALX3O95076 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ALX3O95076 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms