Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
USP1O94782 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP1O94782 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.4■□□□□ 0.7
USP1O94782 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP1O94782 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
USP1O94782 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP1O94782 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.4■□□□□ 0.7
USP1O94782 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP1O94782 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.4■□□□□ 0.7
USP1O94782 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP1O94782 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP1O94782 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP1O94782 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP1O94782 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
USP1O94782 POM121L13P-201ENST00000422362 380 ntBASIC19.4■□□□□ 0.7
USP1O94782 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.4■□□□□ 0.7
USP1O94782 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.4■□□□□ 0.7
USP1O94782 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.4■□□□□ 0.7
USP1O94782 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.4■□□□□ 0.7
USP1O94782 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP1O94782 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP1O94782 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP1O94782 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP1O94782 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
USP1O94782 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
USP1O94782 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.4■□□□□ 0.7
USP1O94782 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP1O94782 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
USP1O94782 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
USP1O94782 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP1O94782 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.39■□□□□ 0.7
USP1O94782 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP1O94782 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP1O94782 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP1O94782 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP1O94782 ABHD17AP1-201ENST00000358206 933 ntBASIC19.39■□□□□ 0.69
USP1O94782 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
USP1O94782 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP1O94782 UNC93B5-201ENST00000530315 699 ntBASIC19.39■□□□□ 0.69
USP1O94782 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.39■□□□□ 0.69
USP1O94782 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP1O94782 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
USP1O94782 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP1O94782 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.39■□□□□ 0.69
USP1O94782 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP1O94782 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP1O94782 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.39■□□□□ 0.69
USP1O94782 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP1O94782 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP1O94782 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP1O94782 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP1O94782 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
USP1O94782 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP1O94782 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP1O94782 CROCCP3-202ENST00000420820 1947 ntBASIC19.39■□□□□ 0.69
USP1O94782 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP1O94782 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP1O94782 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP1O94782 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP1O94782 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
USP1O94782 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
USP1O94782 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP1O94782 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP1O94782 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP1O94782 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.38■□□□□ 0.69
USP1O94782 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP1O94782 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
USP1O94782 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP1O94782 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
USP1O94782 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.38■□□□□ 0.69
USP1O94782 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.38■□□□□ 0.69
USP1O94782 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.38■□□□□ 0.69
USP1O94782 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.38■□□□□ 0.69
USP1O94782 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.38■□□□□ 0.69
USP1O94782 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
USP1O94782 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.38■□□□□ 0.69
USP1O94782 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
USP1O94782 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
USP1O94782 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP1O94782 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.38■□□□□ 0.69
USP1O94782 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP1O94782 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.38■□□□□ 0.69
USP1O94782 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP1O94782 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
USP1O94782 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP1O94782 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.37■□□□□ 0.69
USP1O94782 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.37■□□□□ 0.69
USP1O94782 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP1O94782 AC006333.2-201ENST00000607957 2099 ntBASIC19.37■□□□□ 0.69
USP1O94782 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP1O94782 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP1O94782 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP1O94782 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
USP1O94782 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP1O94782 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP1O94782 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP1O94782 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP1O94782 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP1O94782 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP1O94782 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms