Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.79■□□□□ 0.76
TSPAN3O60637 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TSPAN3O60637 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TSPAN3O60637 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.79■□□□□ 0.76
TSPAN3O60637 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.79■□□□□ 0.76
TSPAN3O60637 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TSPAN3O60637 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.79■□□□□ 0.76
TSPAN3O60637 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TSPAN3O60637 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
TSPAN3O60637 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TSPAN3O60637 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.79■□□□□ 0.76
TSPAN3O60637 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.79■□□□□ 0.76
TSPAN3O60637 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.79■□□□□ 0.76
TSPAN3O60637 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TSPAN3O60637 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TSPAN3O60637 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.79■□□□□ 0.76
TSPAN3O60637 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TSPAN3O60637 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TSPAN3O60637 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.79■□□□□ 0.76
TSPAN3O60637 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TSPAN3O60637 AC096733.2-201ENST00000609937 1394 ntBASIC19.79■□□□□ 0.76
TSPAN3O60637 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.79■□□□□ 0.76
TSPAN3O60637 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TSPAN3O60637 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TSPAN3O60637 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TSPAN3O60637 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.78■□□□□ 0.76
TSPAN3O60637 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TSPAN3O60637 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TSPAN3O60637 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TSPAN3O60637 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TSPAN3O60637 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.78■□□□□ 0.76
TSPAN3O60637 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TSPAN3O60637 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.78■□□□□ 0.76
TSPAN3O60637 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TSPAN3O60637 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.78■□□□□ 0.76
TSPAN3O60637 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.78■□□□□ 0.76
TSPAN3O60637 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.78■□□□□ 0.76
TSPAN3O60637 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TSPAN3O60637 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TSPAN3O60637 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TSPAN3O60637 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.78■□□□□ 0.76
TSPAN3O60637 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TSPAN3O60637 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TSPAN3O60637 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TSPAN3O60637 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TSPAN3O60637 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TSPAN3O60637 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.77■□□□□ 0.76
TSPAN3O60637 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TSPAN3O60637 KRT8P11-201ENST00000409686 1436 ntBASIC19.77■□□□□ 0.76
TSPAN3O60637 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
TSPAN3O60637 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TSPAN3O60637 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.77■□□□□ 0.76
TSPAN3O60637 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.77■□□□□ 0.76
TSPAN3O60637 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TSPAN3O60637 TSPY14P-201ENST00000303979 915 ntBASIC19.77■□□□□ 0.76
TSPAN3O60637 AC005521.1-201ENST00000393351 872 ntBASIC19.77■□□□□ 0.76
TSPAN3O60637 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.77■□□□□ 0.76
TSPAN3O60637 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
TSPAN3O60637 EGLN1P1-201ENST00000531623 762 ntBASIC19.77■□□□□ 0.76
TSPAN3O60637 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.77■□□□□ 0.76
TSPAN3O60637 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TSPAN3O60637 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.77■□□□□ 0.76
TSPAN3O60637 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.77■□□□□ 0.76
TSPAN3O60637 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TSPAN3O60637 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TSPAN3O60637 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TSPAN3O60637 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TSPAN3O60637 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.76■□□□□ 0.75
TSPAN3O60637 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TSPAN3O60637 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TSPAN3O60637 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TSPAN3O60637 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
TSPAN3O60637 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TSPAN3O60637 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TSPAN3O60637 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TSPAN3O60637 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TSPAN3O60637 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TSPAN3O60637 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TSPAN3O60637 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.76■□□□□ 0.75
TSPAN3O60637 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TSPAN3O60637 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.76■□□□□ 0.75
TSPAN3O60637 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TSPAN3O60637 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.76■□□□□ 0.75
TSPAN3O60637 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.76■□□□□ 0.75
TSPAN3O60637 KRT18P57-201ENST00000443599 1254 ntBASIC19.76■□□□□ 0.75
TSPAN3O60637 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TSPAN3O60637 RN7SL850P-201ENST00000579959 291 ntBASIC19.76■□□□□ 0.75
TSPAN3O60637 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.76■□□□□ 0.75
TSPAN3O60637 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.76■□□□□ 0.75
TSPAN3O60637 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TSPAN3O60637 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
TSPAN3O60637 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TSPAN3O60637 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TSPAN3O60637 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TSPAN3O60637 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TSPAN3O60637 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TSPAN3O60637 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TSPAN3O60637 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TSPAN3O60637 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
TSPAN3O60637 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms