Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TSPY17P-201ENST00000450329 467 ntBASIC19.03■□□□□ 0.64
PCDHGA12O60330 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHGA12O60330 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.03■□□□□ 0.64
PCDHGA12O60330 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHGA12O60330 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA12O60330 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA12O60330 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.03■□□□□ 0.64
PCDHGA12O60330 AL023803.3-201ENST00000615559 522 ntBASIC19.03■□□□□ 0.64
PCDHGA12O60330 AC092720.2-201ENST00000602388 1665 ntBASIC19.03■□□□□ 0.64
PCDHGA12O60330 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA12O60330 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA12O60330 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA12O60330 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGA12O60330 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGA12O60330 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA12O60330 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA12O60330 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA12O60330 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA12O60330 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGA12O60330 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA12O60330 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
PCDHGA12O60330 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PCDHGA12O60330 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA12O60330 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA12O60330 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGA12O60330 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHGA12O60330 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA12O60330 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PCDHGA12O60330 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA12O60330 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA12O60330 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGA12O60330 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA12O60330 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA12O60330 AC092647.4-201ENST00000457211 535 ntBASIC19.02■□□□□ 0.64
PCDHGA12O60330 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PCDHGA12O60330 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHGA12O60330 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.02■□□□□ 0.64
PCDHGA12O60330 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA12O60330 AC141257.4-201ENST00000634557 245 ntBASIC19.02■□□□□ 0.64
PCDHGA12O60330 AC136944.6-201ENST00000634818 245 ntBASIC19.02■□□□□ 0.64
PCDHGA12O60330 AP000550.4-202ENST00000639755 178 ntBASIC19.02■□□□□ 0.64
PCDHGA12O60330 AL031432.5-201ENST00000641059 760 ntBASIC19.02■□□□□ 0.64
PCDHGA12O60330 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA12O60330 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA12O60330 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGA12O60330 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.02■□□□□ 0.63
PCDHGA12O60330 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGA12O60330 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
PCDHGA12O60330 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA12O60330 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA12O60330 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA12O60330 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHGA12O60330 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA12O60330 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA12O60330 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA12O60330 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.01■□□□□ 0.63
PCDHGA12O60330 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGA12O60330 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA12O60330 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA12O60330 Z85996.1-201ENST00000494644 937 ntBASIC19.01■□□□□ 0.63
PCDHGA12O60330 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHGA12O60330 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHGA12O60330 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHGA12O60330 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA12O60330 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHGA12O60330 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGA12O60330 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA12O60330 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA12O60330 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA12O60330 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA12O60330 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA12O60330 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGA12O60330 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA12O60330 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA12O60330 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDHGA12O60330 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHGA12O60330 TMEM179-206ENST00000616017 1645 ntBASIC19■□□□□ 0.63
PCDHGA12O60330 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA12O60330 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA12O60330 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA12O60330 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19■□□□□ 0.63
PCDHGA12O60330 AL353719.1-201ENST00000566847 864 ntBASIC19■□□□□ 0.63
PCDHGA12O60330 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
PCDHGA12O60330 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHGA12O60330 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
PCDHGA12O60330 AL162377.1-201ENST00000618844 1793 ntBASIC19■□□□□ 0.63
PCDHGA12O60330 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA12O60330 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA12O60330 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA12O60330 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA12O60330 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA12O60330 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA12O60330 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA12O60330 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA12O60330 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19■□□□□ 0.63
PCDHGA12O60330 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGA12O60330 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA12O60330 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGA12O60330 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PCDHGA12O60330 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms