Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC28A2O43868 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC28A2O43868 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A2O43868 CYP2D8P-201ENST00000433633 1490 ntBASIC18.47■□□□□ 0.55
SLC28A2O43868 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A2O43868 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC28A2O43868 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SLC28A2O43868 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A2O43868 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A2O43868 KRT18P48-201ENST00000434763 852 ntBASIC18.47■□□□□ 0.55
SLC28A2O43868 KRT16P5-201ENST00000455284 522 ntBASIC18.47■□□□□ 0.55
SLC28A2O43868 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A2O43868 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
SLC28A2O43868 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC28A2O43868 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC28A2O43868 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SLC28A2O43868 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SLC28A2O43868 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A2O43868 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A2O43868 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A2O43868 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A2O43868 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SLC28A2O43868 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A2O43868 AP001271.2-201ENST00000624018 1556 ntBASIC18.47■□□□□ 0.55
SLC28A2O43868 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC28A2O43868 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A2O43868 AC120498.9-201ENST00000339021 3867 ntBASIC18.46■□□□□ 0.55
SLC28A2O43868 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC28A2O43868 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A2O43868 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A2O43868 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A2O43868 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC28A2O43868 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC28A2O43868 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A2O43868 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A2O43868 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC28A2O43868 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A2O43868 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC28A2O43868 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A2O43868 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A2O43868 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A2O43868 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A2O43868 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC28A2O43868 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A2O43868 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A2O43868 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SLC28A2O43868 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SLC28A2O43868 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.46■□□□□ 0.54
SLC28A2O43868 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SLC28A2O43868 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.45■□□□□ 0.54
SLC28A2O43868 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC28A2O43868 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC28A2O43868 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC28A2O43868 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC28A2O43868 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC28A2O43868 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC28A2O43868 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
SLC28A2O43868 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.45■□□□□ 0.54
SLC28A2O43868 AC023632.3-201ENST00000521633 145 ntBASIC18.45■□□□□ 0.54
SLC28A2O43868 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC28A2O43868 AC010947.1-201ENST00000623454 693 ntBASIC18.45■□□□□ 0.54
SLC28A2O43868 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC28A2O43868 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC28A2O43868 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SLC28A2O43868 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC28A2O43868 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC28A2O43868 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC28A2O43868 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC28A2O43868 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC28A2O43868 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC28A2O43868 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC28A2O43868 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SLC28A2O43868 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC28A2O43868 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC28A2O43868 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC28A2O43868 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC28A2O43868 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC28A2O43868 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC28A2O43868 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC28A2O43868 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC28A2O43868 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC28A2O43868 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC28A2O43868 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC28A2O43868 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.44■□□□□ 0.54
SLC28A2O43868 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
SLC28A2O43868 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.44■□□□□ 0.54
SLC28A2O43868 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.44■□□□□ 0.54
SLC28A2O43868 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.44■□□□□ 0.54
SLC28A2O43868 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC28A2O43868 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.44■□□□□ 0.54
SLC28A2O43868 LINC01238-205ENST00000567549 1107 ntBASIC18.44■□□□□ 0.54
SLC28A2O43868 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC28A2O43868 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC28A2O43868 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC28A2O43868 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC28A2O43868 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC28A2O43868 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.44■□□□□ 0.54
SLC28A2O43868 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC28A2O43868 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC28A2O43868 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms