Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.21■□□□□ 0.67
LDB2O43679 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LDB2O43679 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LDB2O43679 FP475955.4-201ENST00000623131 1990 ntBASIC19.21■□□□□ 0.67
LDB2O43679 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
LDB2O43679 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.2■□□□□ 0.66
LDB2O43679 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.2■□□□□ 0.66
LDB2O43679 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDB2O43679 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
LDB2O43679 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDB2O43679 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.2■□□□□ 0.66
LDB2O43679 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDB2O43679 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.2■□□□□ 0.66
LDB2O43679 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.2■□□□□ 0.66
LDB2O43679 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LDB2O43679 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LDB2O43679 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
LDB2O43679 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LDB2O43679 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.2■□□□□ 0.66
LDB2O43679 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.2■□□□□ 0.66
LDB2O43679 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.2■□□□□ 0.66
LDB2O43679 AC131212.4-201ENST00000623606 975 ntBASIC19.2■□□□□ 0.66
LDB2O43679 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDB2O43679 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDB2O43679 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LDB2O43679 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.2■□□□□ 0.66
LDB2O43679 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDB2O43679 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LDB2O43679 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDB2O43679 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDB2O43679 FEM1AP3-201ENST00000403722 1741 ntBASIC19.2■□□□□ 0.66
LDB2O43679 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LDB2O43679 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
LDB2O43679 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LDB2O43679 KRT16P1-201ENST00000399124 1418 ntBASIC19.19■□□□□ 0.66
LDB2O43679 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.19■□□□□ 0.66
LDB2O43679 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LDB2O43679 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDB2O43679 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDB2O43679 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDB2O43679 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LDB2O43679 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
LDB2O43679 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDB2O43679 TSPY21P-201ENST00000433481 731 ntBASIC19.19■□□□□ 0.66
LDB2O43679 TSPY23P-201ENST00000440136 739 ntBASIC19.19■□□□□ 0.66
LDB2O43679 UBE2SP1-201ENST00000450587 669 ntBASIC19.19■□□□□ 0.66
LDB2O43679 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.19■□□□□ 0.66
LDB2O43679 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.19■□□□□ 0.66
LDB2O43679 AC073195.1-201ENST00000607241 877 ntBASIC19.19■□□□□ 0.66
LDB2O43679 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.19■□□□□ 0.66
LDB2O43679 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.19■□□□□ 0.66
LDB2O43679 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.19■□□□□ 0.66
LDB2O43679 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LDB2O43679 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LDB2O43679 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LDB2O43679 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LDB2O43679 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LDB2O43679 TNXA-203ENST00000507684 2038 ntBASIC19.18■□□□□ 0.66
LDB2O43679 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB2O43679 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB2O43679 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.18■□□□□ 0.66
LDB2O43679 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LDB2O43679 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB2O43679 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LDB2O43679 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LDB2O43679 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LDB2O43679 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB2O43679 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.18■□□□□ 0.66
LDB2O43679 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LDB2O43679 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LDB2O43679 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.18■□□□□ 0.66
LDB2O43679 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB2O43679 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.18■□□□□ 0.66
LDB2O43679 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.18■□□□□ 0.66
LDB2O43679 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LDB2O43679 CR392000.1-201ENST00000624770 1228 ntBASIC19.18■□□□□ 0.66
LDB2O43679 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.18■□□□□ 0.66
LDB2O43679 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB2O43679 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB2O43679 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB2O43679 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LDB2O43679 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB2O43679 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB2O43679 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDB2O43679 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.17■□□□□ 0.66
LDB2O43679 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LDB2O43679 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.17■□□□□ 0.66
LDB2O43679 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.17■□□□□ 0.66
LDB2O43679 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDB2O43679 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms