Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC2O43543 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC2O43543 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC2O43543 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC2O43543 SDHAP1-207ENST00000440850 2000 ntBASIC16.67■□□□□ 0.26
XRCC2O43543 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC2O43543 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.67■□□□□ 0.26
XRCC2O43543 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.67■□□□□ 0.26
XRCC2O43543 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC2O43543 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC2O43543 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC2O43543 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC2O43543 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.67■□□□□ 0.26
XRCC2O43543 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.67■□□□□ 0.26
XRCC2O43543 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC2O43543 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
XRCC2O43543 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.67■□□□□ 0.26
XRCC2O43543 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.67■□□□□ 0.26
XRCC2O43543 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.67■□□□□ 0.26
XRCC2O43543 KRASP1-201ENST00000407852 552 ntBASIC16.67■□□□□ 0.26
XRCC2O43543 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.67■□□□□ 0.26
XRCC2O43543 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
XRCC2O43543 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.67■□□□□ 0.26
XRCC2O43543 CD99P1-205ENST00000527459 561 ntBASIC16.67■□□□□ 0.26
XRCC2O43543 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.67■□□□□ 0.26
XRCC2O43543 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
XRCC2O43543 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC2O43543 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.67■□□□□ 0.26
XRCC2O43543 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
XRCC2O43543 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC2O43543 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
XRCC2O43543 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC2O43543 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC2O43543 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC2O43543 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
XRCC2O43543 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.66■□□□□ 0.26
XRCC2O43543 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.66■□□□□ 0.26
XRCC2O43543 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.66■□□□□ 0.26
XRCC2O43543 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
XRCC2O43543 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.66■□□□□ 0.26
XRCC2O43543 KRT16P5-201ENST00000455284 522 ntBASIC16.66■□□□□ 0.26
XRCC2O43543 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 AC233263.1-201ENST00000578059 224 ntBASIC16.66■□□□□ 0.26
XRCC2O43543 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.66■□□□□ 0.26
XRCC2O43543 AL023875.1-201ENST00000640777 796 ntBASIC16.66■□□□□ 0.26
XRCC2O43543 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.66■□□□□ 0.26
XRCC2O43543 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.66■□□□□ 0.26
XRCC2O43543 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.66■□□□□ 0.26
XRCC2O43543 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
XRCC2O43543 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.66■□□□□ 0.26
XRCC2O43543 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
XRCC2O43543 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
XRCC2O43543 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.65■□□□□ 0.26
XRCC2O43543 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
XRCC2O43543 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
XRCC2O43543 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
XRCC2O43543 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.65■□□□□ 0.26
XRCC2O43543 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
XRCC2O43543 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
XRCC2O43543 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
XRCC2O43543 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.65■□□□□ 0.26
XRCC2O43543 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
XRCC2O43543 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
XRCC2O43543 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.65■□□□□ 0.26
XRCC2O43543 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.65■□□□□ 0.26
XRCC2O43543 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.65■□□□□ 0.26
XRCC2O43543 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.65■□□□□ 0.26
XRCC2O43543 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
XRCC2O43543 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.65■□□□□ 0.26
XRCC2O43543 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.65■□□□□ 0.26
XRCC2O43543 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
XRCC2O43543 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.65■□□□□ 0.26
XRCC2O43543 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.65■□□□□ 0.26
XRCC2O43543 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
XRCC2O43543 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
XRCC2O43543 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
XRCC2O43543 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
XRCC2O43543 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
XRCC2O43543 TNXA-203ENST00000507684 2038 ntBASIC16.65■□□□□ 0.26
XRCC2O43543 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
XRCC2O43543 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.65■□□□□ 0.26
XRCC2O43543 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms