Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.53■□□□□ 0.56
CDX4O14627 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.52■□□□□ 0.56
CDX4O14627 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDX4O14627 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDX4O14627 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDX4O14627 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDX4O14627 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDX4O14627 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDX4O14627 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDX4O14627 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CDX4O14627 MIR662-201ENST00000384847 95 ntBASIC18.52■□□□□ 0.56
CDX4O14627 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CDX4O14627 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDX4O14627 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CDX4O14627 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDX4O14627 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CDX4O14627 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.52■□□□□ 0.56
CDX4O14627 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
CDX4O14627 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.52■□□□□ 0.56
CDX4O14627 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.52■□□□□ 0.56
CDX4O14627 AC012615.1-201ENST00000565797 1299 ntBASIC18.52■□□□□ 0.56
CDX4O14627 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.52■□□□□ 0.56
CDX4O14627 AL671883.3-201ENST00000603274 991 ntBASIC18.52■□□□□ 0.56
CDX4O14627 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDX4O14627 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDX4O14627 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDX4O14627 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.52■□□□□ 0.55
CDX4O14627 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.52■□□□□ 0.55
CDX4O14627 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
CDX4O14627 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDX4O14627 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CDX4O14627 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDX4O14627 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDX4O14627 GPAT2P1-201ENST00000444924 1672 ntBASIC18.51■□□□□ 0.55
CDX4O14627 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.51■□□□□ 0.55
CDX4O14627 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.51■□□□□ 0.55
CDX4O14627 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDX4O14627 AL662844.1-201ENST00000546340 181 ntBASIC18.51■□□□□ 0.55
CDX4O14627 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.51■□□□□ 0.55
CDX4O14627 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDX4O14627 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.51■□□□□ 0.55
CDX4O14627 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.51■□□□□ 0.55
CDX4O14627 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.51■□□□□ 0.55
CDX4O14627 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CDX4O14627 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDX4O14627 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDX4O14627 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDX4O14627 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CDX4O14627 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDX4O14627 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDX4O14627 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.5■□□□□ 0.55
CDX4O14627 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDX4O14627 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.5■□□□□ 0.55
CDX4O14627 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDX4O14627 MRPL3P1-201ENST00000400109 1033 ntBASIC18.5■□□□□ 0.55
CDX4O14627 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDX4O14627 SEC1P-202ENST00000473944 940 ntBASIC18.5■□□□□ 0.55
CDX4O14627 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CDX4O14627 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.5■□□□□ 0.55
CDX4O14627 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.5■□□□□ 0.55
CDX4O14627 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.5■□□□□ 0.55
CDX4O14627 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDX4O14627 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CDX4O14627 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDX4O14627 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDX4O14627 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDX4O14627 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.5■□□□□ 0.55
CDX4O14627 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDX4O14627 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDX4O14627 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDX4O14627 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDX4O14627 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDX4O14627 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDX4O14627 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDX4O14627 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CDX4O14627 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDX4O14627 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CDX4O14627 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.49■□□□□ 0.55
CDX4O14627 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CDX4O14627 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDX4O14627 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.49■□□□□ 0.55
CDX4O14627 TOB2P1-201ENST00000469761 992 ntBASIC18.49■□□□□ 0.55
CDX4O14627 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.49■□□□□ 0.55
CDX4O14627 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDX4O14627 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.49■□□□□ 0.55
CDX4O14627 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.49■□□□□ 0.55
CDX4O14627 RNF126P1-202ENST00000569893 925 ntBASIC18.49■□□□□ 0.55
CDX4O14627 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.49■□□□□ 0.55
CDX4O14627 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
CDX4O14627 AC139530.3-201ENST00000620344 690 ntBASIC18.49■□□□□ 0.55
CDX4O14627 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.49■□□□□ 0.55
CDX4O14627 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDX4O14627 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDX4O14627 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDX4O14627 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDX4O14627 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDX4O14627 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDX4O14627 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CDX4O14627 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDX4O14627 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms