Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.91■□□□□ 0.3
CCL21O00585 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCL21O00585 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL21O00585 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL21O00585 LINC00565-201ENST00000562710 2331 ntBASIC16.91■□□□□ 0.3
CCL21O00585 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL21O00585 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL21O00585 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL21O00585 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CCL21O00585 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CCL21O00585 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL21O00585 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL21O00585 AC009237.14-201ENST00000609975 1594 ntBASIC16.9■□□□□ 0.3
CCL21O00585 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL21O00585 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.9■□□□□ 0.3
CCL21O00585 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL21O00585 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL21O00585 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL21O00585 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL21O00585 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL21O00585 SPDYE13P-201ENST00000445314 798 ntBASIC16.9■□□□□ 0.3
CCL21O00585 RASA4DP-201ENST00000460726 1199 ntBASIC16.9■□□□□ 0.3
CCL21O00585 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.9■□□□□ 0.3
CCL21O00585 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.9■□□□□ 0.3
CCL21O00585 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.9■□□□□ 0.3
CCL21O00585 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.9■□□□□ 0.3
CCL21O00585 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.9■□□□□ 0.3
CCL21O00585 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.9■□□□□ 0.3
CCL21O00585 NPAP1P7-201ENST00000613027 823 ntBASIC16.9■□□□□ 0.3
CCL21O00585 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL21O00585 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.9■□□□□ 0.3
CCL21O00585 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCL21O00585 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL21O00585 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL21O00585 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.9■□□□□ 0.3
CCL21O00585 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCL21O00585 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL21O00585 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL21O00585 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.9■□□□□ 0.3
CCL21O00585 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL21O00585 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.9■□□□□ 0.3
CCL21O00585 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL21O00585 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCL21O00585 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCL21O00585 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCL21O00585 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL21O00585 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL21O00585 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCL21O00585 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.89■□□□□ 0.29
CCL21O00585 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL21O00585 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL21O00585 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL21O00585 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL21O00585 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL21O00585 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL21O00585 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL21O00585 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL21O00585 TSPY21P-201ENST00000433481 731 ntBASIC16.89■□□□□ 0.29
CCL21O00585 TSPY23P-201ENST00000440136 739 ntBASIC16.89■□□□□ 0.29
CCL21O00585 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.89■□□□□ 0.29
CCL21O00585 BX276092.5-203ENST00000456199 560 ntBASIC16.89■□□□□ 0.29
CCL21O00585 AC092597.1-201ENST00000487352 616 ntBASIC16.89■□□□□ 0.29
CCL21O00585 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL21O00585 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL21O00585 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.89■□□□□ 0.29
CCL21O00585 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL21O00585 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
CCL21O00585 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.89■□□□□ 0.29
CCL21O00585 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL21O00585 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL21O00585 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
CCL21O00585 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL21O00585 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL21O00585 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL21O00585 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL21O00585 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL21O00585 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.88■□□□□ 0.29
CCL21O00585 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CCL21O00585 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL21O00585 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL21O00585 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CCL21O00585 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.88■□□□□ 0.29
CCL21O00585 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL21O00585 AL691432.2-201ENST00000607222 2038 ntBASIC16.88■□□□□ 0.29
CCL21O00585 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL21O00585 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL21O00585 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL21O00585 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL21O00585 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL21O00585 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL21O00585 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.88■□□□□ 0.29
CCL21O00585 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
CCL21O00585 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.88■□□□□ 0.29
CCL21O00585 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL21O00585 RN7SL510P-201ENST00000581311 263 ntBASIC16.88■□□□□ 0.29
CCL21O00585 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL21O00585 AL121672.3-201ENST00000608644 468 ntBASIC16.88■□□□□ 0.29
CCL21O00585 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL21O00585 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL21O00585 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms