Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SLC28A1O00337 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.49■□□□□ 0.55
SLC28A1O00337 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC28A1O00337 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC28A1O00337 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC28A1O00337 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SLC28A1O00337 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC28A1O00337 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC28A1O00337 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC28A1O00337 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
SLC28A1O00337 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC28A1O00337 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC28A1O00337 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC28A1O00337 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SLC28A1O00337 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC28A1O00337 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC28A1O00337 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC28A1O00337 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC28A1O00337 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SLC28A1O00337 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC28A1O00337 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
SLC28A1O00337 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC28A1O00337 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC28A1O00337 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC28A1O00337 FEM1AP3-201ENST00000403722 1741 ntBASIC18.48■□□□□ 0.55
SLC28A1O00337 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC28A1O00337 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC28A1O00337 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC28A1O00337 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC28A1O00337 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC28A1O00337 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC28A1O00337 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SLC28A1O00337 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC28A1O00337 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC28A1O00337 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC28A1O00337 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC28A1O00337 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A1O00337 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A1O00337 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SLC28A1O00337 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A1O00337 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A1O00337 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A1O00337 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.47■□□□□ 0.55
SLC28A1O00337 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A1O00337 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A1O00337 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A1O00337 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A1O00337 PRKY-204ENST00000533551 1019 ntBASIC18.47■□□□□ 0.55
SLC28A1O00337 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.47■□□□□ 0.55
SLC28A1O00337 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A1O00337 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC28A1O00337 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A1O00337 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC28A1O00337 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A1O00337 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A1O00337 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SLC28A1O00337 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A1O00337 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A1O00337 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SLC28A1O00337 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC28A1O00337 AC093525.10-201ENST00000625130 1569 ntBASIC18.47■□□□□ 0.55
SLC28A1O00337 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC28A1O00337 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SLC28A1O00337 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC28A1O00337 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.46■□□□□ 0.55
SLC28A1O00337 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.46■□□□□ 0.55
SLC28A1O00337 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC28A1O00337 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC28A1O00337 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SLC28A1O00337 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC28A1O00337 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC28A1O00337 AC142086.2-201ENST00000569753 217 ntBASIC18.46■□□□□ 0.55
SLC28A1O00337 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.46■□□□□ 0.55
SLC28A1O00337 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SLC28A1O00337 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SLC28A1O00337 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
SLC28A1O00337 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
SLC28A1O00337 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC28A1O00337 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC28A1O00337 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms