Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
EIF3FO00303 AL161938.1-201ENST00000569833 2180 ntBASIC18.79■□□□□ 0.6
EIF3FO00303 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
EIF3FO00303 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EIF3FO00303 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
EIF3FO00303 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
EIF3FO00303 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
EIF3FO00303 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.79■□□□□ 0.6
EIF3FO00303 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.79■□□□□ 0.6
EIF3FO00303 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
EIF3FO00303 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EIF3FO00303 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EIF3FO00303 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EIF3FO00303 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EIF3FO00303 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EIF3FO00303 KRT16P1-201ENST00000399124 1418 ntBASIC18.78■□□□□ 0.6
EIF3FO00303 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
EIF3FO00303 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EIF3FO00303 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EIF3FO00303 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
EIF3FO00303 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EIF3FO00303 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
EIF3FO00303 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.78■□□□□ 0.6
EIF3FO00303 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EIF3FO00303 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.78■□□□□ 0.6
EIF3FO00303 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EIF3FO00303 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
EIF3FO00303 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.78■□□□□ 0.6
EIF3FO00303 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
EIF3FO00303 AC073195.1-201ENST00000607241 877 ntBASIC18.78■□□□□ 0.6
EIF3FO00303 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.78■□□□□ 0.6
EIF3FO00303 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.78■□□□□ 0.6
EIF3FO00303 IRX1P1-201ENST00000438849 1838 ntBASIC18.78■□□□□ 0.6
EIF3FO00303 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EIF3FO00303 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
EIF3FO00303 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EIF3FO00303 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EIF3FO00303 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EIF3FO00303 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EIF3FO00303 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
EIF3FO00303 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
EIF3FO00303 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
EIF3FO00303 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
EIF3FO00303 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EIF3FO00303 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
EIF3FO00303 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EIF3FO00303 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
EIF3FO00303 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EIF3FO00303 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.77■□□□□ 0.6
EIF3FO00303 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.77■□□□□ 0.6
EIF3FO00303 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EIF3FO00303 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EIF3FO00303 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.77■□□□□ 0.6
EIF3FO00303 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EIF3FO00303 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EIF3FO00303 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EIF3FO00303 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EIF3FO00303 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EIF3FO00303 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.77■□□□□ 0.6
EIF3FO00303 AF186192.3-201ENST00000583427 947 ntBASIC18.77■□□□□ 0.6
EIF3FO00303 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.77■□□□□ 0.6
EIF3FO00303 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EIF3FO00303 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
EIF3FO00303 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
EIF3FO00303 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
EIF3FO00303 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.76■□□□□ 0.59
EIF3FO00303 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EIF3FO00303 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
EIF3FO00303 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EIF3FO00303 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.76■□□□□ 0.59
EIF3FO00303 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
EIF3FO00303 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EIF3FO00303 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.76■□□□□ 0.59
EIF3FO00303 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
EIF3FO00303 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EIF3FO00303 TSPY23P-201ENST00000440136 739 ntBASIC18.76■□□□□ 0.59
EIF3FO00303 UBE2SP1-201ENST00000450587 669 ntBASIC18.76■□□□□ 0.59
EIF3FO00303 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
EIF3FO00303 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.76■□□□□ 0.59
EIF3FO00303 AC142381.4-202ENST00000563973 229 ntBASIC18.76■□□□□ 0.59
EIF3FO00303 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
EIF3FO00303 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EIF3FO00303 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
EIF3FO00303 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
EIF3FO00303 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.76■□□□□ 0.59
EIF3FO00303 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.76■□□□□ 0.59
EIF3FO00303 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.76■□□□□ 0.59
EIF3FO00303 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EIF3FO00303 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.76■□□□□ 0.59
EIF3FO00303 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EIF3FO00303 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.75■□□□□ 0.59
EIF3FO00303 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
EIF3FO00303 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EIF3FO00303 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EIF3FO00303 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EIF3FO00303 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EIF3FO00303 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EIF3FO00303 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EIF3FO00303 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EIF3FO00303 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms