Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC188H7C350 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC188H7C350 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC188H7C350 AC083906.6-201ENST00000641366 219 ntBASIC19.96■□□□□ 0.79
CCDC188H7C350 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC188H7C350 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC188H7C350 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC188H7C350 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC188H7C350 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC188H7C350 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC188H7C350 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC188H7C350 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC188H7C350 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC188H7C350 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC188H7C350 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC188H7C350 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC188H7C350 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC188H7C350 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC188H7C350 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CCDC188H7C350 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC188H7C350 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC188H7C350 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC188H7C350 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC188H7C350 AC018470.1-201ENST00000624790 3129 ntBASIC19.95■□□□□ 0.78
CCDC188H7C350 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC188H7C350 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC188H7C350 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC188H7C350 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC188H7C350 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.95■□□□□ 0.78
CCDC188H7C350 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC188H7C350 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCDC188H7C350 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC188H7C350 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.95■□□□□ 0.78
CCDC188H7C350 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC188H7C350 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC188H7C350 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC188H7C350 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC188H7C350 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC188H7C350 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC188H7C350 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCDC188H7C350 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC188H7C350 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC188H7C350 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.95■□□□□ 0.78
CCDC188H7C350 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
CCDC188H7C350 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC188H7C350 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC188H7C350 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC188H7C350 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CCDC188H7C350 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC188H7C350 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC188H7C350 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC188H7C350 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC188H7C350 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC188H7C350 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC188H7C350 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC188H7C350 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC188H7C350 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC188H7C350 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC188H7C350 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC188H7C350 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC188H7C350 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC188H7C350 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC188H7C350 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC188H7C350 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC188H7C350 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC188H7C350 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC188H7C350 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC188H7C350 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC188H7C350 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CCDC188H7C350 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC188H7C350 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC188H7C350 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC188H7C350 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC188H7C350 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC188H7C350 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC188H7C350 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC188H7C350 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CCDC188H7C350 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC188H7C350 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC188H7C350 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC188H7C350 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC188H7C350 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC188H7C350 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC188H7C350 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC188H7C350 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC188H7C350 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC188H7C350 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC188H7C350 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC188H7C350 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC188H7C350 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC188H7C350 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC188H7C350 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC188H7C350 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC188H7C350 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC188H7C350 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC188H7C350 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
CCDC188H7C350 AP006587.1-201ENST00000534129 1502 ntBASIC19.92■□□□□ 0.78
CCDC188H7C350 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC188H7C350 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC188H7C350 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms