Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 AL135905.2-201ENST00000584934 1404 ntBASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 AL158047.1-201ENST00000445918 881 ntBASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 RCC2P6-201ENST00000526625 1557 ntBASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.57■□□□□ 0.4
NPIPB9F8W1W9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 CR392000.1-201ENST00000624770 1228 ntBASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 AL031985.4-201ENST00000642138 673 ntBASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPB9F8W1W9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 AC091390.4-202ENST00000476426 537 ntBASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 KRT8P11-201ENST00000409686 1436 ntBASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.55■□□□□ 0.4
NPIPB9F8W1W9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 AC006333.2-201ENST00000607957 2099 ntBASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 RPS2P55-201ENST00000397318 883 ntBASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 AC012618.2-201ENST00000428058 849 ntBASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 AC008040.2-201ENST00000461049 708 ntBASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 AC107956.1-201ENST00000494359 873 ntBASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 AC233702.5-201ENST00000584107 538 ntBASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPB9F8W1W9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms