Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COLCA2A8K830 KRT18P24-201ENST00000344739 1156 ntBASIC14.8□□□□□ -0.04
COLCA2A8K830 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
COLCA2A8K830 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COLCA2A8K830 AC019171.1-201ENST00000601251 1056 ntBASIC14.8□□□□□ -0.04
COLCA2A8K830 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COLCA2A8K830 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COLCA2A8K830 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
COLCA2A8K830 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC14.8□□□□□ -0.04
COLCA2A8K830 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
COLCA2A8K830 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
COLCA2A8K830 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
COLCA2A8K830 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
COLCA2A8K830 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COLCA2A8K830 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
COLCA2A8K830 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COLCA2A8K830 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
COLCA2A8K830 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
COLCA2A8K830 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COLCA2A8K830 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COLCA2A8K830 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
COLCA2A8K830 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 TPT1-202ENST00000379055 948 ntTSL 2 BASIC14.79□□□□□ -0.04
COLCA2A8K830 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
COLCA2A8K830 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.79□□□□□ -0.04
COLCA2A8K830 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
COLCA2A8K830 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.79□□□□□ -0.04
COLCA2A8K830 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
COLCA2A8K830 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
COLCA2A8K830 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.79□□□□□ -0.04
COLCA2A8K830 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
COLCA2A8K830 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC14.79□□□□□ -0.04
COLCA2A8K830 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC14.79□□□□□ -0.04
COLCA2A8K830 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.79□□□□□ -0.04
COLCA2A8K830 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.79□□□□□ -0.04
COLCA2A8K830 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
COLCA2A8K830 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
COLCA2A8K830 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
COLCA2A8K830 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COLCA2A8K830 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
COLCA2A8K830 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COLCA2A8K830 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
COLCA2A8K830 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.78□□□□□ -0.04
COLCA2A8K830 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
COLCA2A8K830 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.78□□□□□ -0.04
COLCA2A8K830 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COLCA2A8K830 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
COLCA2A8K830 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COLCA2A8K830 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.78□□□□□ -0.04
COLCA2A8K830 MIR6722-201ENST00000617286 78 ntBASIC14.78□□□□□ -0.04
COLCA2A8K830 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COLCA2A8K830 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.78□□□□□ -0.04
COLCA2A8K830 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COLCA2A8K830 AP001094.4-201ENST00000579008 2176 ntBASIC14.78□□□□□ -0.04
COLCA2A8K830 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
COLCA2A8K830 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COLCA2A8K830 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.78□□□□□ -0.04
COLCA2A8K830 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COLCA2A8K830 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.78□□□□□ -0.04
COLCA2A8K830 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.78□□□□□ -0.04
COLCA2A8K830 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COLCA2A8K830 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
COLCA2A8K830 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COLCA2A8K830 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COLCA2A8K830 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COLCA2A8K830 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COLCA2A8K830 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.78□□□□□ -0.04
COLCA2A8K830 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
COLCA2A8K830 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.77□□□□□ -0.04
COLCA2A8K830 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.77□□□□□ -0.04
COLCA2A8K830 AL121761.2-201ENST00000598007 1648 ntBASIC14.77□□□□□ -0.04
COLCA2A8K830 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
COLCA2A8K830 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COLCA2A8K830 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
COLCA2A8K830 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COLCA2A8K830 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.77□□□□□ -0.04
COLCA2A8K830 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COLCA2A8K830 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.77□□□□□ -0.04
COLCA2A8K830 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.77□□□□□ -0.04
COLCA2A8K830 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
COLCA2A8K830 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
COLCA2A8K830 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms