Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC006333.2-201ENST00000607957 2099 ntBASIC17.71■□□□□ 0.43
CPSF4LA6NMK7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.71■□□□□ 0.43
CPSF4LA6NMK7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPSF4LA6NMK7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.71■□□□□ 0.43
CPSF4LA6NMK7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPSF4LA6NMK7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CPSF4LA6NMK7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CPSF4LA6NMK7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
CPSF4LA6NMK7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.71■□□□□ 0.42
CPSF4LA6NMK7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CPSF4LA6NMK7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.71■□□□□ 0.42
CPSF4LA6NMK7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 AC092666.2-201ENST00000613287 246 ntBASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CPSF4LA6NMK7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 CROCCP3-202ENST00000420820 1947 ntBASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 TUBB8P6-201ENST00000436895 1288 ntBASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 AC069152.1-201ENST00000438030 544 ntBASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 AC133041.1-202ENST00000642053 222 ntBASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CPSF4LA6NMK7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 KRT18P16-201ENST00000510337 1294 ntBASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.68■□□□□ 0.42
CPSF4LA6NMK7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms