Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RCCD1A6NED2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RCCD1A6NED2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
RCCD1A6NED2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RCCD1A6NED2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.41■□□□□ 0.86
RCCD1A6NED2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.41■□□□□ 0.86
RCCD1A6NED2 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.41■□□□□ 0.86
RCCD1A6NED2 KRT18P16-201ENST00000510337 1294 ntBASIC20.41■□□□□ 0.86
RCCD1A6NED2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.41■□□□□ 0.86
RCCD1A6NED2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.41■□□□□ 0.86
RCCD1A6NED2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RCCD1A6NED2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.41■□□□□ 0.86
RCCD1A6NED2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.41■□□□□ 0.86
RCCD1A6NED2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.41■□□□□ 0.86
RCCD1A6NED2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.41■□□□□ 0.86
RCCD1A6NED2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RCCD1A6NED2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RCCD1A6NED2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RCCD1A6NED2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RCCD1A6NED2 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RCCD1A6NED2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
RCCD1A6NED2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RCCD1A6NED2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RCCD1A6NED2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RCCD1A6NED2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RCCD1A6NED2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
RCCD1A6NED2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RCCD1A6NED2 AC026185.1-201ENST00000445748 174 ntBASIC20.4■□□□□ 0.86
RCCD1A6NED2 AC079598.2-202ENST00000546624 1451 ntBASIC20.4■□□□□ 0.86
RCCD1A6NED2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RCCD1A6NED2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.4■□□□□ 0.86
RCCD1A6NED2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
RCCD1A6NED2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RCCD1A6NED2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.4■□□□□ 0.86
RCCD1A6NED2 PCDHB18P-201ENST00000524813 2368 ntBASIC20.39■□□□□ 0.86
RCCD1A6NED2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RCCD1A6NED2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.39■□□□□ 0.86
RCCD1A6NED2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.39■□□□□ 0.86
RCCD1A6NED2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RCCD1A6NED2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
RCCD1A6NED2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RCCD1A6NED2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RCCD1A6NED2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.39■□□□□ 0.86
RCCD1A6NED2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RCCD1A6NED2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RCCD1A6NED2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.39■□□□□ 0.86
RCCD1A6NED2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.39■□□□□ 0.86
RCCD1A6NED2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RCCD1A6NED2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RCCD1A6NED2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RCCD1A6NED2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.39■□□□□ 0.85
RCCD1A6NED2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RCCD1A6NED2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.39■□□□□ 0.85
RCCD1A6NED2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RCCD1A6NED2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RCCD1A6NED2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RCCD1A6NED2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RCCD1A6NED2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RCCD1A6NED2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RCCD1A6NED2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RCCD1A6NED2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RCCD1A6NED2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.39■□□□□ 0.85
RCCD1A6NED2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.39■□□□□ 0.85
RCCD1A6NED2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.39■□□□□ 0.85
RCCD1A6NED2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.39■□□□□ 0.85
RCCD1A6NED2 GUSBP6-202ENST00000438529 1198 ntBASIC20.39■□□□□ 0.85
RCCD1A6NED2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.39■□□□□ 0.85
RCCD1A6NED2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.39■□□□□ 0.85
RCCD1A6NED2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.39■□□□□ 0.85
RCCD1A6NED2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RCCD1A6NED2 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.39■□□□□ 0.85
RCCD1A6NED2 AC092118.2-201ENST00000613495 667 ntBASIC20.39■□□□□ 0.85
RCCD1A6NED2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.39■□□□□ 0.85
RCCD1A6NED2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
RCCD1A6NED2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RCCD1A6NED2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RCCD1A6NED2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.38■□□□□ 0.85
RCCD1A6NED2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RCCD1A6NED2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RCCD1A6NED2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RCCD1A6NED2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RCCD1A6NED2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RCCD1A6NED2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms