Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CDHR4A6H8M9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDHR4A6H8M9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 AC239809.2-201ENST00000415381 517 ntBASIC17.65■□□□□ 0.42
CDHR4A6H8M9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 HLA-A-209ENST00000638375 975 ntBASIC17.65■□□□□ 0.42
CDHR4A6H8M9 AL023875.1-201ENST00000640777 796 ntBASIC17.65■□□□□ 0.42
CDHR4A6H8M9 FP475955.4-201ENST00000623131 1990 ntBASIC17.65■□□□□ 0.42
CDHR4A6H8M9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 IRX1P1-201ENST00000438849 1838 ntBASIC17.65■□□□□ 0.42
CDHR4A6H8M9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDHR4A6H8M9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDHR4A6H8M9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
CDHR4A6H8M9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDHR4A6H8M9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.64■□□□□ 0.41
CDHR4A6H8M9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 KRASP1-201ENST00000407852 552 ntBASIC17.63■□□□□ 0.41
CDHR4A6H8M9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 AL160286.2-201ENST00000567150 934 ntBASIC17.63■□□□□ 0.41
CDHR4A6H8M9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 AC006333.2-201ENST00000607957 2099 ntBASIC17.63■□□□□ 0.41
CDHR4A6H8M9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.63■□□□□ 0.41
CDHR4A6H8M9 AC120498.9-201ENST00000339021 3867 ntBASIC17.63■□□□□ 0.41
CDHR4A6H8M9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDHR4A6H8M9 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDHR4A6H8M9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDHR4A6H8M9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDHR4A6H8M9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CDHR4A6H8M9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CDHR4A6H8M9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CDHR4A6H8M9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CDHR4A6H8M9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDHR4A6H8M9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms